RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 ERVMER34-1Q9H9K5 563 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 SEC16AO15027 2179 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 A0A1B0GTQ1 180 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 CDHR4A6H8M9 788 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 AGRPO00253 132 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 CLDN4O14493 209 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 BRINP1O60477 761 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 RFPL3O75679 317 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 SC5DO75845 299 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ARL6IP5O75915 188 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 SNAPC5O75971 98 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 NKX2-2O95096 273 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 UBL3O95164 117 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 SBK2P0C263 348 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 SAGP10523 405 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 FOLR1P15328 257 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 TBXA2RP21731 343 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 THBS2P35442 1172 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 PI4KAP42356 2102 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 RBM34P42696 430 aaKnown RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 POU6F2P78424 691 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 IGLV3-21P80748 117 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF267Q14586 743 aaPredicted RBP10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 GRM7Q14831 915 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 BTBD16Q32M84 506 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 CD276Q5ZPR3 534 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 RTL4Q6ZR62 310 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 UTS2BQ765I0 119 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 CEACAM19Q7Z692 300 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 PLXDC1Q8IUK5 500 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 SAMD12Q8N8I0 201 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR4M1Q8NGD0 313 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 OR1L3Q8NH93 324 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 BPIFA2Q96DR5 249 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 DGAT2Q96PD7 388 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 TIMP4Q99727 224 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 IFT27Q9BW83 186 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 DPH1Q9BZG8 443 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 CHRNA10Q9GZZ6 450 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ZCCHC4Q9H5U6 513 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 CUTCQ9NTM9 273 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 B3GNT2Q9NY97 397 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 EMC3Q9P0I2 261 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 ERVK-19Q9WJR5 959 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 RASD1Q9Y272 281 aa10.11□□□□□ -0.79
SH3RF1-203ENST00000508685 CACNA1HO95180 2353 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 FAM183AA6NL82 134 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 PRKNO60260 465 aaPredicted RBP10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 FZD7O75084 574 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 PTP4A3O75365 173 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 GATBO75879 557 aaKnown RBP10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 IGKV1D-16P01601 117 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 STOMP27105 288 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 HTR2AP28223 471 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 SHC1P29353 583 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 HTR2BP41595 481 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 GPR3P46089 330 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 ARL4DP49703 201 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 MMP15P51511 669 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 RPS7P62081 194 aaKnown RBP10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 NTRK2Q16620 822 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 KLHL12Q53G59 568 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC22A10Q63ZE4 541 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 DMKNQ6E0U4 476 aaPredicted RBP10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 ARHGAP11AQ6P4F7 1023 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 ARL9Q6T311 187 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 NPSR1Q6W5P4 371 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 TMPRSS9Q7Z410 1059 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 LUZP2Q86TE4 346 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 TMEM99Q8N816 258 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF614Q8N883 585 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 HOXB13Q92826 284 aaPredicted RBP10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 SNAPC3Q92966 411 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 PTP4A1Q93096 173 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 KISS1RQ969F8 398 aaPredicted RBP10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 SCMH1Q96GD3 660 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 VSTM2LQ96N03 204 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 IRF2BPLQ9H1B7 796 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 AKAP7Q9P0M2 348 aaPredicted RBP10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 TEKT2Q9UIF3 430 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 SIGLEC7Q9Y286 467 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 FREM2Q5SZK8 3169 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
SH3RF1-203ENST00000508685 A0A1B0GVI7 797 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 H0YIG0 161 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 ZNF749O43361 778 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 LYPD3O95274 346 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 IFNA16P05015 189 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 RAB3BP20337 219 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 MAKP20794 623 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 SLC6A6P31641 620 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 HSD17B7P56937 341 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 ARPC4P59998 168 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 ACTA2P62736 377 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 ACTG2P63267 376 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 GPLD1P80108 840 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 IKZF1Q13422 519 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 CAMK2BQ13554 666 aa10.09□□□□□ -0.79
SH3RF1-203ENST00000508685 PMS2CLQ68D20 193 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms