RNA–Protein interactions for RNA: ENST00000508532.5

ATP2C1-214, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,969 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-214ENST00000508532 HOXB3P14651 431 aaPredicted RBP13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 IFNGR1P15260 489 aa13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 CDK2P24941 298 aa13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 BLOC1S1P78537 153 aa13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 BDH1Q02338 343 aa13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 DYRK1AQ13627 763 aa13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 PDGFRLQ15198 375 aa13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 RBMS2Q15434 407 aaKnown RBP13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 ZCCHC12Q6PEW1 402 aa13.54□□□□□ -0.24
ATP2C1-214ENST00000508532 GIPP09681 153 aaPredicted RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 OR2T7P0C7T2 308 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 F3P13726 295 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 TBXA2RP21731 343 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 SQSTM1Q13501 440 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 HNRNPA1L2Q32P51 320 aaKnown RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 C2orf27AQ580R0 203 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 ADGRG3Q86Y34 549 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 OR2T27Q8NH04 317 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 C6orf106Q9H6K1 298 aaPredicted RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 ZMAT3Q9HA38 289 aaKnown RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 SLC6A20Q9NP91 592 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 CLDND1Q9NY35 253 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 EDARQ9UNE0 448 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 C7orf66A4D0T2 115 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 FGF19O95750 216 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 RBM34P42696 430 aaKnown RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 GPNMBQ14956 572 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 THSD4Q6ZMP0 1018 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 ZNF547Q8IVP9 402 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 TSPAN10Q9H1Z9 355 aaPredicted RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 TAS2R8Q9NYW2 309 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 ENPP1P22413 925 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 CD34P28906 385 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 AGTR1P30556 359 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 CTXN1P60606 82 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 TMEM215Q68D42 235 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 GAL3ST4Q96RP7 486 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 CENPMQ9NSP4 180 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 SCML1Q9UN30 329 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 A0A1B0GWA3 101 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 PBX2P40425 430 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 AIMP2Q13155 320 aaKnown RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 CBFBQ13951 182 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 CDNFQ49AH0 187 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 SLC25A30Q5SVS4 291 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 ARHGAP40Q5TG30 622 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 HLA-DQA1Q5Y7H0 255 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 CDRT4Q8N9R6 151 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 OR51D1Q8NGF3 324 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 OR51S1Q8NGJ8 323 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 WDR34Q96EX3 536 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 SLC6A7Q99884 636 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 ZNF350Q9GZX5 532 aa13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 MRPS33Q9Y291 106 aaKnown RBP13.53□□□□□ -0.24
ATP2C1-214ENST00000508532 DCDC2BA2VCK2 349 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 CDC40O60508 579 aaKnown RBP eCLIP13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 SNAPC5O75971 98 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 MPC2O95563 127 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 RAB40ALP0C0E4 278 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 SULT1A3P0DMM9 295 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 SULT1A4P0DMN0 295 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 ERVK-21P61565 698 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 ITPRIPL2Q3MIP1 535 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 PRRT3Q5FWE3 981 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 TRILQ7L0X0 811 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 NDUFAF7Q7L592 441 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 C12orf45Q8N5I9 185 aaPredicted RBP13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 TMIEQ8NEW7 156 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 RAB40AQ8WXH6 277 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 SDF2Q99470 211 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 KCNJ15Q99712 375 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 H7C1C5 153 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 ANKRD34CP0C6C1 535 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 ITGA3P26006 1051 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 LCN6P62502 163 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 CNKSR3Q6P9H4 555 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 KIAA1324Q6UXG2 1013 aaKnown RBP13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 RNF113BQ8IZP6 322 aaKnown RBP13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 C12orf76Q8N812 135 aaPredicted RBP13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 PXT1Q8NFP0 134 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 TMEM106AQ96A25 262 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 SLC22A18Q96BI1 424 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 ULBP3Q9BZM4 244 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 C12orf10Q9HB07 376 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 NCDNQ9UBB6 729 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 ACAD8Q9UKU7 415 aa13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 EXOGQ9Y2C4 368 aaKnown RBP13.52□□□□□ -0.24
ATP2C1-214ENST00000508532 ZNF432O94892 652 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 RECKO95980 971 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 HLA-DQB1P01920 261 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 SPARCP09486 303 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 HIST1H1CP16403 213 aaKnown RBP13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 DLSTP36957 453 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 LUMP51884 338 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 CDK5R1Q15078 307 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 EOGTQ5NDL2 527 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 GTPBP8Q8N3Z3 284 aaPredicted RBP13.52□□□□□ -0.25
ATP2C1-214ENST00000508532 ELL3Q9HB65 397 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms