RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ANP32DO95626 131 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 JCHAINP01591 159 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 CCDC192P0DO97 292 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 HSPD1P10809 573 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 CCR2P41597 374 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 PI4KAP42356 2102 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 SLC6A8P48029 635 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 STARP49675 285 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 HNRNPFP52597 415 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 PPP1R8Q12972 351 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 AGKQ53H12 422 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 CYBRD1Q53TN4 286 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 FAM78AQ5JUQ0 283 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 ZNF562Q6V9R5 426 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 STAC2Q6ZMT1 411 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 PEX5LQ8IYB4 626 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 LRRC17Q8N6Y2 441 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 WDR36Q8NI36 951 aaKnown RBP3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 TCEAL4Q96EI5 215 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 BOLA2Q9H3K6 86 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 ABCB11O95342 1321 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 FRMPD4Q14CM0 1322 aa3.12□□□□□ -1.91
TOPBP1-206ENST00000508524 HELZP42694 1942 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 SAGE2PA6NJ88 616 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 USP27XA6NNY8 438 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 ABCD4O14678 606 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 TRIM16O95361 564 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 SLC35G4P0C7Q5 338 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 TOP1P11387 765 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 VDRP11473 427 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 RPS2P15880 293 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 GDI1P31150 447 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 KRT83P78385 493 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 PLOD1Q02809 727 aaPredicted RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 PON2Q15165 354 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 LRRC36Q1X8D7 754 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 TEX44Q53QW1 395 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 CLEC18BQ6UXF7 455 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 SYVN1Q86TM6 617 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 ZNF589Q86UQ0 364 aaPredicted RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 ARFGAP2Q8N6H7 521 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 C10orf53Q8N6V4 93 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 C7orf33Q8WU49 177 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 ART4Q93070 314 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 MCHR2Q969V1 340 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 ZNF560Q96MR9 790 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 MBOAT7Q96N66 472 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 PATZ1Q9HBE1 687 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 COMMD8Q9NX08 183 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 LCMT1Q9UIC8 334 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 PRG3Q9Y2Y8 225 aaPredicted RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 TNRC6BQ9UPQ9 1833 aaKnown RBP3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 VWA8A3KMH1 1905 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 MYH7P12883 1935 aa3.11□□□□□ -1.91
TOPBP1-206ENST00000508524 IGHV7-81A0A0B4J1V7 117 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 IGKV6-21A0A0C4DH24 114 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 SPECC1L-ADORA2AF8WAN1 911 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 M0QZ92 97 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 PPIHO43447 177 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 GOSR1O95249 250 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 IGLL1P15814 213 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 CCND2P30279 289 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 TDO2P48775 406 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 CRYBB1P53674 252 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 LIM2P55344 173 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 SRYQ05066 204 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 UBE2V2Q15819 145 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 SLX4IPQ5VYV7 408 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 BTNL3Q6UXE8 466 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 PAQR9Q6ZVX9 377 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 NET1Q7Z628 596 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 C17orf82Q86X59 251 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 ALLCQ8N6M5 410 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 OR2A12Q8NGT7 310 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 PSMA8Q8TAA3 256 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 ANKRD49Q8WVL7 239 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 DCUN1D4Q92564 292 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 TAF4BQ92750 862 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 TADA1Q96BN2 335 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 STARD4Q96DR4 205 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 SIRPDQ9H106 197 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 OR1A1Q9P1Q5 309 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 GHRLQ9UBU3 117 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 NAP1L2Q9ULW6 460 aaPredicted RBP3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 TEX264Q9Y6I9 313 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 MTCL1Q9Y4B5 1905 aaKnown RBP3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 NID2Q14112 1375 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 JMJD1CQ15652 2540 aa3.1□□□□□ -1.91
TOPBP1-206ENST00000508524 PTPRDP23468 1912 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 THADAQ6YHU6 1953 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 A0A1B0GUA9 196 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 MYBPHLA2RUH7 354 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 TUBAL3A6NHL2 446 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 SUPT7LO94864 414 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 CCNE2O96020 404 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 CENPBP07199 599 aaPredicted RBP3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 VDAC1P21796 283 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 U2AF2P26368 475 aaKnown RBP eCLIP3.09□□□□□ -1.912e-6■□□□□ 11.2
TOPBP1-206ENST00000508524 ADORA2BP29275 332 aa3.09□□□□□ -1.91
TOPBP1-206ENST00000508524 ADSSP30520 456 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms