RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 GPN1Q9HCN4 374 aaPredicted RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM248Q9NWD8 314 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 GULP1Q9UBP9 304 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 NOP16Q9Y3C1 178 aaKnown RBP6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 PCDHB1Q9Y5F3 818 aa6.7□□□□□ -1.34
LIMCH1-207ENST00000508466 C4orf47A7E2U8 309 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 MBTPS2O43462 519 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 PCCBP05166 539 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 CLTBP09497 229 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 THEGLP0DJG4 465 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 PDHA2P29803 388 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 RORAP35398 523 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 LHX1P48742 406 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 EFNB2P52799 333 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 B4GALNT1Q00973 533 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 NKAPLQ5M9Q1 402 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ADGRF1Q5T601 910 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF683Q8IZ20 524 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 NXPE1Q8N323 547 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 AMER3Q8N944 861 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM104Q8NE00 496 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 OR9A1PQ8NGU1 263 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 OR6K3Q8NGY3 331 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 NKD1Q969G9 470 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 GAL3ST4Q96RP7 486 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 SMIM3Q9BZL3 60 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF350Q9GZX5 532 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC2A4RGQ9NR83 387 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 GNG8Q9UK08 70 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF223Q9UK11 482 aaPredicted RBP6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ZMIZ1Q9ULJ6 1067 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 TRAV27A0A087WT01 109 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM72A0PK05 275 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ARL5CA6NH57 179 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 UBE2CO00762 179 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 EIF4E2O60573 245 aaKnown RBP6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 EPPINO95925 133 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 S100A8P05109 93 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 GKN3PP0CG01 181 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ARAFP10398 606 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ABOP16442 354 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 VAMP1P23763 118 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ACKR3P25106 362 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 HTR2AP28223 471 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 RHOAP61586 193 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ST8SIA6P61647 398 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 RNF4P78317 190 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 LASP1Q14847 261 aaKnown RBP6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 NDUFAF6Q330K2 333 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 OR2A2Q6IF42 318 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 ETFRF1Q6IPR1 90 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM205Q6UW68 189 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 APCDD1Q8J025 514 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 OR4S1Q8NGB4 309 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 OR1J2Q8NGS2 313 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 DTD1Q8TEA8 209 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 C16orf78Q8WTQ4 265 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 CMTM3Q96MX0 182 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 LMF1Q96S06 567 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 GMLQ99445 158 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 SYT17Q9BSW7 474 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 G6PC3Q9BUM1 346 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 RAB33BQ9H082 229 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 SEBOXQ9HB31 216 aaPredicted RBP6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 FGF20Q9NP95 211 aaPredicted RBP6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 MED9Q9NWA0 146 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 TMEM45AQ9NWC5 275 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 TAAR2Q9P1P5 351 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 SCML2Q9UQR0 700 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 SLC45A1Q9Y2W3 748 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 DOCK3Q8IZD9 2030 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 SCN3AQ9NY46 2000 aa6.69□□□□□ -1.34
LIMCH1-207ENST00000508466 PLXND1Q9Y4D7 1925 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FEZF1A0PJY2 475 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TUBAL3A6NHL2 446 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 IFNL4K9M1U5 179 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 DCTN6O00399 190 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 BRINP1O60477 761 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 MED6O75586 246 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 GJB5O95377 273 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ADH1CP00326 375 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 IFNA2P01563 188 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SFTPCP11686 197 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF28P17035 718 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 RCC1P18754 421 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TACR2P21452 398 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 HOXC13P31276 330 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 GNG10P50151 68 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PCBP3P57721 371 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 RING1Q06587 406 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ST3GAL3Q11203 375 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 KIAA0141Q14154 515 aaPredicted RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 DUSP5Q16690 384 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 FAM76BQ5HYJ3 339 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ANXA8L1Q5VT79 327 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 ZNF343Q6P1L6 599 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 PAPD4Q6PIY7 484 aaKnown RBP6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 SPNS3Q6ZMD2 512 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 TPRA1Q86W33 373 aa6.68□□□□□ -1.34
LIMCH1-207ENST00000508466 C17orf78Q8N4C9 275 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms