RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 UPF3BQ9BZI7 483 aaKnown RBP3.66□□□□□ -1.82
GYPA-205ENST00000508337 IL26Q9NPH9 171 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 PTTG3PQ9NZH4 202 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 MTCH1Q9NZJ7 389 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 CTSFQ9UBX1 484 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 CDH9Q9ULB4 789 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 FOXJ3Q9UPW0 622 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 SLCO1B1Q9Y6L6 691 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 ATRXP46100 2492 aa3.66□□□□□ -1.82
GYPA-205ENST00000508337 TRAV25A0A0B4J276 109 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 IQANK1A0A1B0GTG1 560 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 A0A1W2PPV4 95 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 TMEM120BA0PK00 339 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 GOLGA8IPA6NC78 632 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 TUBAL3A6NHL2 446 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 PCP4L1A6NKN8 68 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 TRPC5OSA6NMA1 111 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 IQCF5A8MTL0 148 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 A8MXQ7 604 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 BCKDKO14874 412 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 ARPC3O15145 178 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 CALUO43852 315 aaPredicted RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 BCAS1O75363 584 aaPredicted RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 NEBLO76041 1014 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 OR5F1O95221 314 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 KRT6AP02538 564 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 P0C879 139 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 MX1P20591 662 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 MSR1P21757 451 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 HTR2AP28223 471 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 HNRNPH3P31942 346 aaKnown RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 RPL4P36578 427 aaKnown RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 PPP1R2P41236 205 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 SLC6A8P48029 635 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 HLCSP50747 726 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 DAOAP59103 153 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 OSTNP61366 133 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 RPL32P62910 135 aaKnown RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 PJVKQ0ZLH3 352 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 ACSF3Q4G176 576 aaPredicted RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 TEX44Q53QW1 395 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 XKR7Q5GH72 579 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 C9orf129Q5T035 196 aaKnown RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 DMKNQ6E0U4 476 aaPredicted RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 PPP1R2P3Q6NXS1 205 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 TMEM53Q6P2H8 277 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 CBLN3Q6UW01 205 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 FRA10AC1Q70Z53 315 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 VSTM4Q8IW00 320 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 KIFAP3Q92845 792 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 RAB1CQ92928 201 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 ZBED3Q96IU2 234 aaPredicted RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 TSNARE1Q96NA8 513 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 CNPY3Q9BT09 278 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 TEKT3Q9BXF9 490 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 NMUR2Q9GZQ4 415 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 UXTQ9UBK9 157 aaPredicted RBP3.65□□□□□ -1.83
GYPA-205ENST00000508337 PRO0461Q9UI25 63 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 PIGLQ9Y2B2 252 aa3.65□□□□□ -1.83
GYPA-205ENST00000508337 GOLGA8QA0A0J9YX86 632 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 A0A1B0GVL5 298 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 ESYT2A0FGR8 921 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 PPIAL4DF5H284 164 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 SDHDO14521 159 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 DUX1O43812 170 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 NDUFS6O75380 124 aaKnown RBP3.64□□□□□ -1.83
GYPA-205ENST00000508337 ERLIN2O94905 339 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 DBTP11182 482 aaKnown RBP3.64□□□□□ -1.83
GYPA-205ENST00000508337 CYP11B1P15538 503 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 NCK1P16333 377 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 AXLP30530 894 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 CD80P33681 288 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 NAMPTP43490 491 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 POU3F4P49335 361 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 ACADVLP49748 655 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 NAPAP54920 295 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 DIO3P55073 304 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 C21orf59P57076 290 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 DSTNP60981 165 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 VBP1P61758 197 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 RAB11AP62491 216 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 KDSRQ06136 332 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 ILKQ13418 452 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 DMC1Q14565 340 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 ELAVL3Q14576 367 aaKnown RBP3.64□□□□□ -1.83
GYPA-205ENST00000508337 RAB11BQ15907 218 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 ZNF699Q32M78 642 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 ZNF528Q3MIS6 628 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 PYHIN1Q6K0P9 492 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 RNASEKQ6P5S7 137 aaKnown RBP3.64□□□□□ -1.83
GYPA-205ENST00000508337 FAM159AQ6UWV7 190 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 HSDL2Q6YN16 418 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 Q6ZPB1 254 aaPredicted RBP3.64□□□□□ -1.83
GYPA-205ENST00000508337 NDUFAF7Q7L592 441 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 TMEM179BQ7Z7N9 219 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 SELENOHQ8IZQ5 122 aaKnown RBP3.64□□□□□ -1.83
GYPA-205ENST00000508337 TMEM123Q8N131 208 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 FAM58AQ8N1B3 248 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 GLYATL2Q8WU03 294 aa3.64□□□□□ -1.83
GYPA-205ENST00000508337 EMG1Q92979 244 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms