RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 EPYCQ99645 322 aa17.6■□□□□ 0.41
SFXN1-209ENST00000508290 ASB6Q9NWX5 421 aa17.6■□□□□ 0.41
SFXN1-209ENST00000508290 FLVCR1Q9Y5Y0 555 aa17.6■□□□□ 0.41
SFXN1-209ENST00000508290 SPG11Q96JI7 2443 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 M0QX08 132 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 FXYD1O00168 92 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 TPST1O60507 370 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 LGI1O95970 557 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 IFNA14P01570 189 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 THBDP07204 575 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 TIMM23BQ5SRD1 257 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 FAM69AQ5T7M9 428 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 ZNF613Q6PF04 617 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 C20orf204Q6ZNR8 217 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 BHLHA15Q7RTS1 189 aaPredicted RBP17.59■□□□□ 0.41
SFXN1-209ENST00000508290 UBE2J2Q8N2K1 259 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 OR9K2Q8NGE7 335 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 CXXC4Q9H2H0 198 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 ADPRHL2Q9NX46 363 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 TAS2R16Q9NYV7 291 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 PRSS50Q9UI38 385 aa17.59■□□□□ 0.41
SFXN1-209ENST00000508290 A0A087WUJ7 227 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 A0A0B4J2E0 115 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 LOC100653049A0A140TA62 436 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 A0A1B0GX12 115 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 NDUFAB1O14561 156 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 KRT34O76011 436 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 GGT1P19440 569 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 HTR2AP28223 471 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 GZMMP51124 257 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 ART1P52961 327 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 HOXC5Q00444 222 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 TGFBR3Q03167 851 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 DMTNQ08495 405 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 BNIP2Q12982 314 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 OR7E24Q6IFN5 339 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 CASP12Q6UXS9 341 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 SPATA21Q7Z572 469 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 ABHD12BQ7Z5M8 362 aaPredicted RBP17.58■□□□□ 0.4
SFXN1-209ENST00000508290 CALHM3Q86XJ0 350 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 POMGNT2Q8NAT1 580 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 NRGNQ92686 78 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 ZNF775Q96BV0 537 aaPredicted RBP17.58■□□□□ 0.4
SFXN1-209ENST00000508290 MUCL1Q96DR8 90 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 ARHGDIGQ99819 225 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 ESRP2Q9H6T0 727 aaKnown RBP17.58■□□□□ 0.4
SFXN1-209ENST00000508290 B3GALT5Q9Y2C3 310 aa17.58■□□□□ 0.4
SFXN1-209ENST00000508290 TRAV36DV7A0A075B6V5 113 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-209ENST00000508290 FTCDNL1E5RQL4 147 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 SIAH2O43255 324 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 KLF4O43474 513 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 TMCC2O75069 709 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 AKR7A3O95154 331 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 ATE1O95260 518 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 OR1Q1Q15612 314 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 NRF1Q16656 503 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 DUSP7Q16829 419 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 GLIPR1L2Q4G1C9 344 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 RABL3Q5HYI8 236 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 WFDC8Q8IUA0 241 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 TMEM99Q8N816 258 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 SMYD1Q8NB12 490 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 ADPRHL1Q8NDY3 354 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 C1orf162Q8NEQ5 155 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-209ENST00000508290 PIGTQ969N2 578 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 DNAJA3Q96EY1 480 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 TMEM43Q9BTV4 400 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 CCM2LQ9NUG4 571 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-209ENST00000508290 BEX4Q9NWD9 120 aaPredicted RBP17.57■□□□□ 0.4
SFXN1-209ENST00000508290 BAG5Q9UL15 447 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 PLEKHA6Q9Y2H5 1048 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 CORINQ9Y5Q5 1042 aa17.57■□□□□ 0.4
SFXN1-209ENST00000508290 AIM2O14862 343 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 RAMP1O60894 148 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 IGHV1-2P23083 117 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 EGR4Q05215 589 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 TAB1Q15750 504 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 C22orf34Q6ZV56 151 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 GPAT4Q86UL3 456 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 COMTD1Q86VU5 262 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 C17orf78Q8N4C9 275 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 PROX1Q92786 737 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 MCHR1Q99705 422 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 PIP5K1AQ99755 562 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 PTDSS2Q9BVG9 487 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 RSPO3Q9BXY4 272 aaPredicted RBP17.56■□□□□ 0.4
SFXN1-209ENST00000508290 POLR2J2Q9GZM3 115 aaKnown RBP17.56■□□□□ 0.4
SFXN1-209ENST00000508290 PCDHAC1Q9H158 963 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 POLR2J3Q9H1A7 115 aaKnown RBP17.56■□□□□ 0.4
SFXN1-209ENST00000508290 UPB1Q9UBR1 384 aa17.56■□□□□ 0.4
SFXN1-209ENST00000508290 LOC102725191A0A1B0GVB3 256 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 OR5H1A6NKK0 313 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 FAM220BPB1ANY3 271 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 CHP2O43745 196 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 LYZL6O75951 148 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 PAX7P23759 505 aa17.55■□□□□ 0.4
SFXN1-209ENST00000508290 LOXP28300 417 aaPredicted RBP17.55■□□□□ 0.4
SFXN1-209ENST00000508290 RPS5P46782 204 aaKnown RBP17.55■□□□□ 0.4
SFXN1-209ENST00000508290 SF3A3Q12874 501 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms