RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 GLB1L2Q8IW92 636 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 CDH26Q8IXH8 852 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC35F2Q8IXU6 374 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 CMTM4Q8IZR5 234 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR2L13Q8N349 312 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 COX18Q8N8Q8 333 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 CDRT4Q8N9R6 151 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 LMNTD1Q8N9Z9 388 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 KCT2Q8NC54 265 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 CAMKVQ8NCB2 501 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 BVESQ8NE79 360 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 C17orf47Q8NEP4 570 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 BEST4Q8NFU0 473 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR6M1Q8NGM8 313 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR9A2Q8NGT5 310 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR2A1Q8NGT9 310 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR5J2Q8NH18 312 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 OR14A16Q8NHC5 309 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 NT5CQ8TCD5 201 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 THEM6Q8WUY1 208 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 POF1BQ8WVV4 589 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 EDAQ92838 391 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 KLK6Q92876 244 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 MIB2Q96AX9 1013 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 ARRDC3Q96B67 414 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC22A18Q96BI1 424 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 ORAI1Q96D31 301 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 HAVCR1Q96D42 359 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 TCEAL4Q96EI5 215 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF681Q96N22 645 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 CCNL2Q96S94 520 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 SERINC2Q96SA4 455 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 SDF2Q99470 211 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 TIMP4Q99727 224 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 PRSS27Q9BQR3 290 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 MENTQ9BUN1 341 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 TRMT61BQ9BVS5 477 aaKnown RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF416Q9BWM5 594 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 LGR4Q9BXB1 951 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 REG4Q9BYZ8 158 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 CHIAQ9BZP6 476 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZNF350Q9GZX5 532 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 QRSL1Q9H0R6 528 aaKnown RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 ALX4Q9H161 411 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 ZBP1Q9H171 429 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 MED20Q9H944 212 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 TCF7L1Q9HCS4 588 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 MKKSQ9NPJ1 570 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 IFT46Q9NQC8 304 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 PRSS16Q9NQE7 514 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC17A5Q9NRA2 495 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 PCDHB16Q9NRJ7 776 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 PHPT1Q9NRX4 125 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 IL20RAQ9UHF4 553 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 SERTAD3Q9UJW9 196 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 CLEC4AQ9UMR7 237 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 C19orf53Q9UNZ5 99 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 MOKQ9UQ07 419 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 SIGLEC7Q9Y286 467 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 KCNE3Q9Y6H6 103 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 COLEC10Q9Y6Z7 277 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 OBSL1O75147 1896 aa4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 NUP210Q8TEM1 1887 aaPredicted RBP4.57□□□□□ -1.68
HMGB3P16-201ENST00000508037 HELZP42694 1942 aaKnown RBP4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 FXYD6-FXYD2A0A087WZ82 144 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 A0A0G2JN53 185 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 A0A1B0GVC2 190 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 A6NIN4 97 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 ANXA2P2A6NMY6 339 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 MPTX1A8MV57 137 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 NUDT19A8MXV4 375 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 SULT1C2O00338 296 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 ABCD4O14678 606 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 PHYHO14832 338 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 CCL16O15467 120 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 B3GALT2O43825 422 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 SUSD5O60279 629 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 LCMT2O60294 686 aaKnown RBP4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 FCMRO60667 390 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 PRAMEF2O60811 474 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 RNGTTO60942 597 aaKnown RBP4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 SDC3O75056 442 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 TOXO94900 526 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 PPP1R3DO95685 299 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 CFDP00746 253 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 THY1P04216 161 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 ANXA2P07355 339 aaKnown RBP4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 ADRB1P08588 477 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 MRPL3P09001 348 aaKnown RBP4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 HNRNPA1P09651 372 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 ANKRD34CP0C6C1 535 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 CISD3P0C7P0 127 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 SLC35G6P0C7Q6 338 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 C8orf89P0DMQ9 161 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 CPMP14384 443 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 MGMTP16455 207 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 GJA1P17302 382 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 CXCL2P19875 107 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 MAKP20794 623 aa4.56□□□□□ -1.68
HMGB3P16-201ENST00000508037 ENPP1P22413 925 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms