RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 IER3IP1Q9Y5U9 82 aa12.33□□□□□ -0.43
SNCAIP-209ENST00000508017 A0A0B4J2E0 115 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 A0A1B0GX12 115 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 OR2M5A3KFT3 312 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 ANKRD61A6NGH8 418 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 PRR32B1ATL7 298 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 MCRIP1C9JLW8 97 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 MCIDASD6RGH6 385 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 AIPO00170 330 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 LGALS8O00214 317 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 BET1O15155 118 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 ZNF749O43361 778 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 SIX6O95475 246 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 EML2O95834 649 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 ECDO95905 644 aaPredicted RBP12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 IFNGP01579 166 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 NMBP08949 121 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 GIPP09681 153 aaPredicted RBP12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 EMDP50402 254 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 P2RX1P51575 399 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 NANOS3P60323 173 aaKnown RBP12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 RGS7BPQ6MZT1 257 aaPredicted RBP12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 OR6V1Q8N148 313 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 SPICQ8N5J4 248 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 SYNPRQ8TBG9 265 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 TOE1Q96GM8 510 aaKnown RBP12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 MFRPQ9BY79 579 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 SEMA4CQ9C0C4 833 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 TMEM27Q9HBJ8 222 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 OR5V1Q9UGF6 321 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 CHRNA9Q9UGM1 479 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 KLF15Q9UIH9 416 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 FOXJ3Q9UPW0 622 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 CHD9Q3L8U1 2897 aa12.33□□□□□ -0.44
SNCAIP-209ENST00000508017 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TUBAL3A6NHL2 446 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 ZNF879B4DU55 563 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 ATP6V1G2-DDX39BF2Z307 99 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 SUSD5O60279 629 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 GALR3O60755 368 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 FMO6PO60774 539 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 LPLP06858 475 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TMIGD3P0DMS9 266 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 IFNGR1P15260 489 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 NFYAP23511 347 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 GABRA3P34903 492 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 NUP62P37198 522 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 CAPZA2P47755 286 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 C2orf68Q2NKX9 166 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TMEM69Q5SWH9 247 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 PWWP2BQ6NUJ5 590 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 PRSS41Q7RTY9 318 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TMEM52Q8NDY8 209 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 ST8SIA4Q92187 359 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 SMARCD2Q92925 531 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 DMRTA2Q96SC8 542 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TIMM29Q9BSF4 260 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TSPAN10Q9H1Z9 355 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TAS2R5Q9NYW4 299 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 BAIAP2Q9UQB8 552 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 MRPS2Q9Y399 296 aaKnown RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TCRBV16S1A1N1A0A5B0 115 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 NAP1L6A6NFF2 107 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 ARPC5O15511 151 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TSPAN9O75954 239 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 CT62P0C5K7 136 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 CDK2P24941 298 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 UBE2MP61081 183 aaKnown RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 PLA2G7Q13093 441 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 BAMBIQ13145 260 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 HLXQ14774 488 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 CSRP2Q16527 193 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 OLFML2AQ68BL7 652 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 ZNF626Q68DY1 528 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 FBXO42Q6P3S6 717 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 ZNF613Q6PF04 617 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 USP53Q70EK8 1073 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 C1orf216Q8TAB5 229 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 PMEPA1Q969W9 287 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 SIPA1Q96FS4 1042 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 PHPT1Q9NRX4 125 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 TAS2R10Q9NYW0 307 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 AKAP7Q9P0M2 348 aaPredicted RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 SERTAD3Q9UJW9 196 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 ZNF346Q9UL40 294 aaKnown RBP12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 DAPP1Q9UN19 280 aa12.32□□□□□ -0.44
SNCAIP-209ENST00000508017 A0A1B0GVT2 93 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 PRR19A6NJB7 356 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 C4orf47A7E2U8 309 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 FAM171A2A8MVW0 826 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 NUPL2O15504 423 aaKnown RBP12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 FGF17O60258 216 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 VSIG10L2P0DP72 767 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 AP3S2P59780 193 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 RAP2BP61225 183 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 EXOSC6Q5RKV6 272 aaKnown RBP12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
SNCAIP-209ENST00000508017 OR5M1Q8NGP8 315 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms