RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ZNF239Q16600 458 aaKnown RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 ANKDD1AQ495B1 522 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 RIPPLY2Q5TAB7 128 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 TMEM225Q6GV28 225 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 RPTNQ6XPR3 784 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 FCRLAQ7L513 359 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 TSEN54Q7Z6J9 526 aaKnown RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 TSPYL5Q86VY4 417 aaPredicted RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 SCAIQ8N9R8 606 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 OR52J3Q8NH60 311 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 SLC7A13Q8TCU3 470 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 RND1Q92730 232 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 DENND2DQ9H6A0 471 aaPredicted RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 GP6Q9HCN6 339 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 COQ3Q9NZJ6 369 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 CLCF1Q9UBD9 225 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 ZNF229Q9UJW7 825 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 B3GALT5Q9Y2C3 310 aa17.99■□□□□ 0.47
USP53-203ENST00000507597 SAMHD1Q9Y3Z3 626 aaKnown RBP17.99■□□□□ 0.47
USP53-203ENST00000507597 IGKV1D-42A0A075B6H8 117 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 A0A087WUU8 490 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 MBD3L4A6NDZ8 208 aaPredicted RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 MBD3L3A6NE82 208 aaPredicted RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 MBD3L5A6NJ08 208 aaPredicted RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 J3QKU1 62 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 KPNA4O00629 521 aaPredicted RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 CLOCKO15516 846 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 ZNHIT1O43257 154 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 E2F6O75461 281 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 WISP1O95388 367 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 IMPDH2P12268 514 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 IFI30P13284 250 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 DNAJA1P31689 397 aaKnown RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 SMSP52788 366 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 C1QL3Q5VWW1 255 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 PODNL1Q6PEZ8 512 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 H1FNTQ75WM6 255 aaPredicted RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 MBD3L2Q8NHZ7 208 aaPredicted RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 TAAR8Q969N4 342 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 BPIFA2Q96DR5 249 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 ZNF845Q96IR2 970 aaPredicted RBP17.98■□□□□ 0.47
USP53-203ENST00000507597 TTYH2Q9BSA4 534 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 EMC3Q9P0I2 261 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 RASD1Q9Y272 281 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 SLC5A6Q9Y289 635 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 SVILO95425 2214 aa17.98■□□□□ 0.47
USP53-203ENST00000507597 SHANK1Q9Y566 2161 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 ENO4A6NNW6 628 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 GPR171O14626 319 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 KALRNO60229 2985 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 OR10H3O60404 316 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 CCNB2O95067 398 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 RCBTB2O95199 551 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 CH25HO95992 272 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 SLC9A3P48764 834 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 UGT2B15P54855 530 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 CTBP2P56545 445 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 PRKCDQ05655 676 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 PMPCAQ10713 525 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 PDK3Q15120 406 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 ZNF74Q16587 644 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 OTUD3Q5T2D3 398 aaPredicted RBP17.97■□□□□ 0.47
USP53-203ENST00000507597 WDR88Q6ZMY6 472 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 ADPRHL1Q8NDY3 354 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 FNDC9Q8TBE3 224 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 PTDSS2Q9BVG9 487 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 SF3B5Q9BWJ5 86 aaKnown RBP17.97■□□□□ 0.47
USP53-203ENST00000507597 MAN2C1Q9NTJ4 1040 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 LYVE1Q9Y5Y7 322 aa17.97■□□□□ 0.47
USP53-203ENST00000507597 PRRC2CQ9Y520 2896 aaKnown RBP17.97■□□□□ 0.47
USP53-203ENST00000507597 SH3PXD2BA1X283 911 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 LRRTM2O43300 516 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 CYTIPO60759 359 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 SAGP10523 405 aaPredicted RBP17.96■□□□□ 0.47
USP53-203ENST00000507597 FUT1P19526 365 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 RASGEF1BQ0VAM2 473 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 PMS2P3Q13401 168 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 FJX1Q86VR8 437 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 P3H2Q8IVL5 708 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 NRMQ8IXM6 262 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 OR4K5Q8NGD3 323 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 OR5J2Q8NH18 312 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 ASB5Q8WWX0 329 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 LIPHQ8WWY8 451 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 SLCO4A1Q96BD0 722 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 GMPPAQ96IJ6 420 aaPredicted RBP17.96■□□□□ 0.47
USP53-203ENST00000507597 SRXN1Q9BYN0 137 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 CHST11Q9NPF2 352 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 MRPL39Q9NYK5 338 aaKnown RBP17.96■□□□□ 0.47
USP53-203ENST00000507597 EMC9Q9Y3B6 208 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 FAM215AQ9Y5M1 114 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 GTF3C1Q12789 2109 aa17.96■□□□□ 0.47
USP53-203ENST00000507597 TRBV4-1A0A0J9YWV2 114 aa17.95■□□□□ 0.46
USP53-203ENST00000507597 AQP7P3A6NL99 342 aa17.95■□□□□ 0.46
USP53-203ENST00000507597 EFCAB9A8MZ26 197 aa17.95■□□□□ 0.46
USP53-203ENST00000507597 FTCDNL1E5RQL4 147 aa17.95■□□□□ 0.46
USP53-203ENST00000507597 H0YHG0 523 aa17.95■□□□□ 0.46
USP53-203ENST00000507597 TIPRLO75663 272 aa17.95■□□□□ 0.46
USP53-203ENST00000507597 OR7A10O76100 309 aa17.95■□□□□ 0.46
USP53-203ENST00000507597 BGLAPP02818 100 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms