RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ANKRD49Q8WVL7 239 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 DNAJA4Q8WW22 397 aaPredicted RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 MAIP1Q8WWC4 291 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 SHC3Q92529 594 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 UFD1Q92890 307 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 NT5C3BQ969T7 300 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 C10orf35Q96D05 121 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 TMEM101Q96IK0 257 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 SEC22AQ96IW7 307 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 RPRD1AQ96P16 312 aaPredicted RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 RBM14Q96PK6 669 aaKnown RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 ZBTB18Q99592 522 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 COPS8Q99627 209 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 TRIM62Q9BVG3 475 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 SELENOIQ9C0D9 397 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 AZI2Q9H6S1 392 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 RNF167Q9H6Y7 350 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 THUMPD1Q9NXG2 353 aaKnown RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 ANAPC11Q9NYG5 84 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 ZNF639Q9UID6 485 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 CELA1Q9UNI1 258 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 RPL36Q9Y3U8 105 aaKnown RBP2.34□□□□□ -2.03
LSM6-205ENST00000507449 NEUROG3Q9Y4Z2 214 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 CDH10Q9Y6N8 788 aa2.34□□□□□ -2.03
LSM6-205ENST00000507449 ARHGAP23Q9P227 1491 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 NSG1A0A0A6YYJ2 146 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 KIR2DL5BA0A0G2JN68 375 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 KIR2DL5BA0A0G2JPC4 375 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 A0A1B0GVL5 298 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 A0A1W2PPE3 182 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 HELTA6NFD8 242 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 E9PBE3 544 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 POLR2DO15514 142 aaKnown RBP2.33□□□□□ -2.04
LSM6-205ENST00000507449 UGT1A9O60656 530 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 NPIPB7O75200 414 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 IGLV1-47P01700 117 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 HPNP05981 417 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CCDC130P13994 396 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 GABRR1P24046 479 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CD1BP29016 333 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 RFC4P35249 363 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CTRLP40313 264 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CEBPDP49716 269 aaPredicted RBP2.33□□□□□ -2.04
LSM6-205ENST00000507449 CKAP4Q07065 602 aaKnown RBP2.33□□□□□ -2.04
LSM6-205ENST00000507449 NCBP1Q09161 790 aaKnown RBP2.33□□□□□ -2.04
LSM6-205ENST00000507449 ASPHQ12797 758 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 PLD1Q13393 1074 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 KLHL38Q2WGJ6 581 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 PARP15Q460N3 678 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 FILIP1LQ4L180 1135 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CASC10Q5T4H9 136 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 OR2A2Q6IF42 318 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 ENPP6Q6UWR7 440 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 SH2D6Q7Z4S9 175 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 SLC26A11Q86WA9 606 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CCDC65Q8IXS2 484 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 KIR2DL5AQ8N109 375 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 OR10G3Q8NGC4 313 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 OR51S1Q8NGJ8 323 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 KIR2DL5BQ8NHK3 375 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 C12orf42Q96LP6 360 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 KCNA7Q96RP8 456 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CLCC1Q96S66 551 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 HIST1H4GQ99525 98 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 ROPN1BQ9BZX4 212 aaPredicted RBP2.33□□□□□ -2.04
LSM6-205ENST00000507449 NHEJ1Q9H9Q4 299 aaPredicted RBP2.33□□□□□ -2.04
LSM6-205ENST00000507449 HYPKQ9NX55 129 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 BTNL2Q9UIR0 455 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 COPS3Q9UNS2 423 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 CROCCQ5TZA2 2017 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 PLEKHH1Q9ULM0 1364 aa2.33□□□□□ -2.04
LSM6-205ENST00000507449 IQANK1A0A1B0GTG1 560 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 A0A1W2PPV9 198 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 BTBD17A6NE02 478 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 OR52A4PA6NMU1 304 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 TMEM110-MUSTN1A8MSY1 372 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 A8MUA0 341 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 A8MXQ7 604 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 LOC110117498-PIK3R3F6TDL0 507 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 ABCD4O14678 606 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 CLDN9O95484 217 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 OXSR1O95747 527 aaPredicted RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 KRT6AP02538 564 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 ETS2P15036 469 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 COX7A1P24310 79 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 HTR1EP28566 365 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 BTCP35070 178 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 KIR2DS4P43632 304 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 KPNA2P52292 529 aaKnown RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 NUP107P57740 925 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 SELENOTP62341 195 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 ORC2Q13416 577 aaPredicted RBP2.32□□□□□ -2.04
LSM6-205ENST00000507449 GK3PQ14409 553 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 GPNMBQ14956 572 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 PHYHD1Q5SRE7 291 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 TIGD3Q6B0B8 471 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 CTRB2Q6GPI1 263 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 C1orf94Q6P1W5 598 aa2.32□□□□□ -2.04
LSM6-205ENST00000507449 GDPD3Q7L5L3 318 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms