RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 FKRPQ9H9S5 495 aa11.72□□□□□ -0.53
POLR2J3-212ENST00000507355 MEAF6Q9HAF1 191 aa11.72□□□□□ -0.53
POLR2J3-212ENST00000507355 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-212ENST00000507355 PMF1-BGLAPU3KQ54 211 aa11.72□□□□□ -0.53
POLR2J3-212ENST00000507355 LOC100289279A0A1B0GTE1 492 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 TM9SF1O15321 606 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 SPRY1O43609 319 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 LY6HO94772 140 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 AKR7A3O95154 331 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 PGRP06401 933 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 GPIP06744 558 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 DBIP07108 87 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 GKN3PP0CG01 181 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 BMP4P12644 408 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 CDH2P19022 906 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 HNF1AP20823 631 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 RPS4Y1P22090 263 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 USF1P22415 310 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 CXCR1P25024 350 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 MPGP29372 298 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 EFNA4P52798 201 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 PRPS1P60891 318 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 LSM11P83369 360 aaKnown RBP eCLIP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 OR7A5Q15622 319 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 GSTA3Q16772 222 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 OGFOD2Q6N063 350 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 WDR93Q6P2C0 686 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 AAED1Q7RTV5 226 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 KIRREL3Q8IZU9 778 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 C1orf162Q8NEQ5 155 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 PNPT1Q8TCS8 783 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 C10orf105Q8TEF2 133 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 TMEM45BQ96B21 275 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 ZBTB9Q96C00 473 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 AURKBQ96GD4 344 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 ZNF385AQ96PM9 386 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 AIG1Q9NVV5 245 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 RLIMQ9NVW2 624 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 MOKQ9UQ07 419 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 MGAM2Q2M2H8 2515 aa11.71□□□□□ -0.53
POLR2J3-212ENST00000507355 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 SDHDO14521 159 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 KLF11O14901 512 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 WNT11O96014 354 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 UQCRBP14927 111 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 ACAA2P42765 397 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 GZMKP49863 264 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 TXNL4AP83876 142 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 BST1Q10588 318 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 BNIP2Q12982 314 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 MAPK11Q15759 364 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 MST1LQ2TV78 715 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 HIKESHIQ53FT3 197 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 LIPNQ5VXI9 398 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 TMEM225Q6GV28 225 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 SPATA19Q7Z5L4 167 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 VRK2Q86Y07 508 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 PEX5LQ8IYB4 626 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 ZNF440Q8IYI8 595 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 PROX1Q92786 737 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 C3orf49Q96BT1 292 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 FBXO17Q96EF6 278 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 PAIP2Q9BPZ3 127 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 SF3B5Q9BWJ5 86 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 CENPHQ9H3R5 247 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 GPR45Q9Y5Y3 372 aa11.7□□□□□ -0.54
POLR2J3-212ENST00000507355 ARFGEF3Q5TH69 2177 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 AQP7P3A6NL99 342 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 KRT75O95678 551 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 LRRC74AQ0VAA2 488 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 SWI5Q1ZZU3 235 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 C1QTNF12Q5T7M4 302 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 KLHL24Q6TFL4 600 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 ZNF836Q6ZNA1 936 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 GPAT4Q86UL3 456 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 CADM2Q8N3J6 435 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 MREGQ8N565 214 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 POMGNT2Q8NAT1 580 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 OR52P1PQ8NH57 321 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 C1orf159Q96HA4 380 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 WDR55Q9H6Y2 383 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 TMEM45AQ9NWC5 275 aa11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 V9GYY5 206 aaPredicted RBP11.69□□□□□ -0.54
POLR2J3-212ENST00000507355 CDHR4A6H8M9 788 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 A8MVM7 634 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 KRT33AO76009 404 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 EPHA3P29320 983 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 MVDP53602 400 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 COPZ1P61923 177 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 SQLEQ14534 574 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 WBP2NLQ6ICG8 309 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 C12orf54Q6X4T0 127 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 CREB3L2Q70SY1 520 aa11.68□□□□□ -0.54
POLR2J3-212ENST00000507355 ABHD12BQ7Z5M8 362 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms