RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CADM2Q8N3J6 435 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 GOLGA6L1Q8N7Z2 621 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 OR52N5Q8NH56 324 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 TMEM19Q96HH6 336 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 SPATA5L1Q9BVQ7 753 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 SLCO5A1Q9H2Y9 848 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 A4GALTQ9NPC4 353 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 TCF7L2Q9NQB0 619 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 CBLN4Q9NTU7 201 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 CORO2BQ9UQ03 480 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 RASD1Q9Y272 281 aa12.69□□□□□ -0.38
HMGCS1-203ENST00000507004 CLIC1O00299 241 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 OR2T1O43869 369 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 TP53P04637 393 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 ITGA5P08648 1049 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 GTF2E2P29084 291 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 TTKP33981 857 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 CHRNB3Q05901 458 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 CEACAM7Q14002 265 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 RGNQ15493 299 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 OR7A5Q15622 319 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 MAPK11Q15759 364 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 ZNF311Q5JNZ3 666 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 C1orf140Q5VVS0 124 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 VRK2Q86Y07 508 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 KRT73Q86Y46 540 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 BHLHE22Q8NFJ8 381 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 OR9K2Q8NGE7 335 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 MFSD8Q8NHS3 518 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 LRRC8CQ8TDW0 803 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 GTF2H4Q92759 462 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 OR52B2Q96RD2 323 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 CCDC28BQ9BUN5 200 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 SLC17A5Q9NRA2 495 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 SLC7A10Q9NS82 523 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 RLIMQ9NVW2 624 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 NPAP1Q9NZP6 1156 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 FBXO9Q9UK97 447 aaPredicted RBP12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 GMEB1Q9Y692 573 aa12.68□□□□□ -0.38
HMGCS1-203ENST00000507004 ZC3H12DA2A288 527 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 TLX2O43763 284 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 RAMP1O60894 148 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 KRT33AO76009 404 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 CSF3P09919 207 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 PRKAR1BP31321 381 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 CDKN1AP38936 164 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 ZNF83P51522 516 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 SH3BGRP55822 239 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 DMTNQ08495 405 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 MFSD13AQ14CX5 517 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 TSPO2Q5TGU0 170 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 NET1Q7Z628 596 aaPredicted RBP12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 MUC15Q8N387 334 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 TMEM99Q8N816 258 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 ANKK1Q8NFD2 765 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 OR52E4Q8NGH9 312 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 NEUROG1Q92886 237 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 RHNO1Q9BSD3 238 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 REG4Q9BYZ8 158 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 RABEP2Q9H5N1 569 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 RPS6KB2Q9UBS0 482 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 PCDHB14Q9Y5E9 798 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 FN1P02751 2386 aaKnown RBP12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 PLCE1Q9P212 2302 aa12.67□□□□□ -0.38
HMGCS1-203ENST00000507004 NSD1Q96L73 2696 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 PRORSD1PA6NEY8 169 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 ZNF587BE7ETH6 402 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 M0R1B8 84 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 FRS3O43559 492 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 AKAP8O43823 692 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 NPIPB7O75200 414 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 AKR7A3O95154 331 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 CD8AP01732 235 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 C1QCP02747 245 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 VIMP08670 466 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 PNMTP11086 282 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 NTF4P34130 210 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 ATP4BP51164 291 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 RAB35Q15286 201 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 C3orf36Q3SXR2 165 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 LRIF1Q5T3J3 769 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 C6orf89Q6UWU4 347 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 DNM1P46Q6ZS02 220 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 MAVSQ7Z434 540 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 ATG4DQ86TL0 474 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 GPAT4Q86UL3 456 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 OR9I1Q8NGQ6 314 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 MAGEE2Q8TD90 523 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 DNAJA4Q8WW22 397 aaPredicted RBP12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 STON2Q8WXE9 905 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 VPS33AQ96AX1 596 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 C3orf49Q96BT1 292 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 LINC00470Q9BZP3 86 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 PAIP1Q9H074 479 aaKnown RBP12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 ADPRHL2Q9NX46 363 aa12.66□□□□□ -0.38
HMGCS1-203ENST00000507004 RCE1Q9Y256 329 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms