RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 CCL28Q9NRJ3 127 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 UFSP2Q9NUQ7 469 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 SMOXQ9NWM0 555 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 RBAKQ9NYW8 714 aaPredicted RBP1.73□□□□□ -2.13
GYPB-207ENST00000506679 CLCF1Q9UBD9 225 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 RNF14Q9UBS8 474 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 MEMO1Q9Y316 297 aa1.73□□□□□ -2.13
GYPB-207ENST00000506679 A0A096LNJ9 63 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 A0A0G2JN53 185 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 ANKRD63C9JTQ0 380 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 LOC110117498-PIK3R3F6TDL0 507 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 PES1O00541 588 aaKnown RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 AGPAT2O15120 278 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 NBR2O15453 112 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 RIPK2O43353 540 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 MBTPS2O43462 519 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 WISP3O95389 354 aaPredicted RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 AP2A1O95782 977 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 P04436 131 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 ALOX5P09917 674 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 TSPY4P0CV99 314 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 TSPY10P0CW01 314 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 ADRB3P13945 408 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 PTMSP20962 102 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 ATP6V1C1P21283 382 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 HNRNPA2B1P22626 353 aaKnown RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 ANXA13P27216 316 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 EFNB2P52799 333 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 CRYBB1P53674 252 aaPredicted RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 ASPHQ12797 758 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 KLRB1Q12918 225 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 ATP6AP1Q15904 470 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 ZNF691Q5VV52 312 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 TIGD3Q6B0B8 471 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 SLC25A24Q6NUK1 477 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 SLC35F2Q8IXU6 374 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 GMCL1P1Q8NEA9 526 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 OR9G1Q8NH87 305 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 CTNNBL1Q8WYA6 563 aaPredicted RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 NDRG1Q92597 394 aaKnown RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 FGF11Q92914 225 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 EMG1Q92979 244 aaKnown RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 RAB7BQ96AH8 199 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 EFHD2Q96C19 240 aaPredicted RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 TM4SF19Q96DZ7 209 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 ITCHQ96J02 903 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 TMEM246Q9BRR3 403 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 SLC17A9Q9BYT1 436 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 RAB34Q9BZG1 259 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 LRRN3Q9H3W5 708 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 RMND5AQ9H871 391 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 QPCTLQ9NXS2 382 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 TMOD2Q9NZR1 351 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 NUFIP1Q9UHK0 495 aaKnown RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 MRPS33Q9Y291 106 aaKnown RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 RPL36Q9Y3U8 105 aaKnown RBP1.72□□□□□ -2.13
GYPB-207ENST00000506679 TIMM10BQ9Y5J6 103 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 PNPLA6Q8IY17 1366 aa1.72□□□□□ -2.13
GYPB-207ENST00000506679 DLGAP1O14490 977 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 UGT1A9O60656 530 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 NOL3O60936 208 aaKnown RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 ICOSLGO75144 302 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 TNFSF13O75888 250 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 POU2F1P14859 743 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 RPA2P15927 270 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 GCAP28676 217 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 GLP1RP43220 463 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 VDAC2P45880 294 aaPredicted RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 QARSP47897 775 aaKnown RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 CASP4P49662 377 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 SUCLG1P53597 346 aaKnown RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 PKNOX1P55347 436 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 LINC00315P59091 139 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 PAX5Q02548 391 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 MADCAM1Q13477 382 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 PSG5Q15238 335 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 TPD52L1Q16890 204 aaPredicted RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 MICBQ29980 383 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 TSPO2Q5TGU0 170 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 TMEM225Q6GV28 225 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 OR52E8Q6IFG1 317 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 CCDC80Q76M96 950 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 NLRP9Q7RTR0 991 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 TMEM61Q8N0U2 210 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 TMEM123Q8N131 208 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 OR2T3Q8NH03 318 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 GIMAP1Q8WWP7 306 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 RLN3Q8WXF3 142 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 SYAP1Q96A49 352 aaPredicted RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 OXGR1Q96P68 337 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 MRPL45Q9BRJ2 306 aaKnown RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 REEP4Q9H6H4 257 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 PATZ1Q9HBE1 687 aaKnown RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 DMAP1Q9NPF5 467 aaPredicted RBP1.71□□□□□ -2.14
GYPB-207ENST00000506679 EPS15L1Q9UBC2 864 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 COPS3Q9UNS2 423 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 TRAPPC4Q9Y296 219 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 ATP6V0A2Q9Y487 856 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 AP1M2Q9Y6Q5 423 aa1.71□□□□□ -2.14
GYPB-207ENST00000506679 IGLV4-69A0A075B6H9 119 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms