RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 OR1Q1Q15612 314 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 NRF1Q16656 503 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 DEFB113Q30KQ7 82 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 ALG10BQ5I7T1 473 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 C1orf140Q5VVS0 124 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 PAMR1Q6UXH9 720 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 HACD2Q6Y1H2 254 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 SLC15A3Q8IY34 581 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 MICU2Q8IYU8 434 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 LSMEM1Q8N8F7 131 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 STK35Q8TDR2 534 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 FAM222BQ8WU58 562 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 DNAJA4Q8WW22 397 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-209ENST00000506630 ZNF775Q96BV0 537 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-209ENST00000506630 MCHR1Q99705 422 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 ARHGDIGQ99819 225 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 HOPXQ9BPY8 73 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-209ENST00000506630 POTEKPQ9BYX7 375 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 KLHL4Q9C0H6 718 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 BCO1Q9HAY6 547 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 C12orf10Q9HB07 376 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 PLSCR4Q9NRQ2 329 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 ELOVL5Q9NYP7 299 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 EMC3Q9P0I2 261 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 GMPR2Q9P2T1 348 aaKnown RBP11.65□□□□□ -0.54
TCOF1-209ENST00000506630 ING1Q9UK53 422 aaPredicted RBP11.65□□□□□ -0.54
TCOF1-209ENST00000506630 BOLA1Q9Y3E2 137 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 AKAP6Q13023 2319 aa11.65□□□□□ -0.54
TCOF1-209ENST00000506630 MAP1AP78559 2803 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-209ENST00000506630 HRNRQ86YZ3 2850 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-209ENST00000506630 A0A0B4J2E0 115 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 A0A1B0GX12 115 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 SH3D21A4FU49 640 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 LIPT2A6NK58 231 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 CPSF4LA6NMK7 179 aaKnown RBP11.64□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF814B7Z6K7 855 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 NME4O00746 187 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 TPST2O60704 377 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 EIF1BO60739 113 aaKnown RBP11.64□□□□□ -0.55
TCOF1-209ENST00000506630 RAMP1O60894 148 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 INHBBP09529 407 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 PTNP21246 168 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 GTF2E2P29084 291 aaKnown RBP11.64□□□□□ -0.55
TCOF1-209ENST00000506630 CCKARP32238 428 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 CRYBA2P53672 197 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 LIPEQ05469 1076 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 NPTX1Q15818 432 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 OTUD3Q5T2D3 398 aaPredicted RBP11.64□□□□□ -0.55
TCOF1-209ENST00000506630 FAM91A1Q658Y4 838 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 ULK3Q6PHR2 472 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 C6orf89Q6UWU4 347 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 CLEC9AQ6UXN8 241 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 TFAP2EQ6VUC0 442 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 BEND4Q6ZU67 534 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
TCOF1-209ENST00000506630 CCDC103Q8IW40 242 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 WFDC11Q8NEX6 87 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 OR4D11Q8NGI4 311 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 OR6T1Q8NGN1 323 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 PROX1Q92786 737 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 SLC47A1Q96FL8 570 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 LRRC37BQ96QE4 947 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 CCT8L2Q96SF2 557 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 SMR3AQ99954 134 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 ALG2Q9H553 416 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 FANCFQ9NPI8 374 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 ADPRHL2Q9NX46 363 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 SLC9A8Q9Y2E8 581 aa11.64□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF716A6NP11 495 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 ZNF724A8MTY0 619 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 FAM171A2A8MVW0 826 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 C16orf97H3BN30 126 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 NDUFAB1O14561 156 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 GSTA4O15217 222 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 NPIPB7O75200 414 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 AKR7A3O95154 331 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 FAM107AO95990 144 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 IFNA14P01570 189 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 PNMTP11086 282 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 UGT2B10P36537 528 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 RPS5P46782 204 aaKnown RBP11.63□□□□□ -0.55
TCOF1-209ENST00000506630 PSME3P61289 254 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 EGR4Q05215 589 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 ENTPD8Q5MY95 495 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 GKAP1Q5VSY0 366 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-209ENST00000506630 C8orf82Q6P1X6 216 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-209ENST00000506630 PAQR6Q6TCH4 344 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 GALNT5Q7Z7M9 940 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 RBM45Q8IUH3 476 aaKnown RBP11.63□□□□□ -0.55
TCOF1-209ENST00000506630 TMEM99Q8N816 258 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 SLC38A4Q969I6 547 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 SLC25A36Q96CQ1 311 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 C6orf203Q9P0P8 240 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-209ENST00000506630 NDRG3Q9UGV2 375 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 BAG5Q9UL15 447 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 NOSIPQ9Y314 301 aaKnown RBP11.63□□□□□ -0.55
TCOF1-209ENST00000506630 SH3GLB1Q9Y371 365 aa11.63□□□□□ -0.55
TCOF1-209ENST00000506630 FLNAP21333 2647 aaKnown RBP11.62□□□□□ -0.55
TCOF1-209ENST00000506630 IGKV3D-15A0A087WSY6 115 aa11.62□□□□□ -0.55
TCOF1-209ENST00000506630 AQP7P3A6NL99 342 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms