RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 NCF2P19878 526 aaPredicted RBP18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 ABCE1P61221 599 aaKnown RBP18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 CASP8Q14790 479 aa18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 FAM174BQ3ZCQ3 159 aa18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 CNOT9Q92600 299 aaKnown RBP18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 C3orf49Q96BT1 292 aa18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 BOD1Q96IK1 185 aa18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 CCDC115Q96NT0 180 aa18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 THUMPD1Q9NXG2 353 aaKnown RBP18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 DNHD1Q96M86 4753 aa18.39■□□□□ 0.53
SQSTM1-210ENST00000506042 TMEM72A0PK05 275 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 AQP7P3A6NL99 342 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 A8MVM7 634 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 AKAP8O43823 692 aaKnown RBP18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 SCGB2A2Q13296 93 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 CEACAM7Q14002 265 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 LARS2Q15031 903 aaKnown RBP18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 OR7A5Q15622 319 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 LIN52Q52LA3 116 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 WBP2NLQ6ICG8 309 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 SPATA19Q7Z5L4 167 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 RNF130Q86XS8 419 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 AURKBQ96GD4 344 aaPredicted RBP18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 ANKRD27Q96NW4 1050 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 CA10Q9NS85 328 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 P2RX2Q9UBL9 471 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 RASD1Q9Y272 281 aa18.38■□□□□ 0.53
SQSTM1-210ENST00000506042 CCDC154A6NI56 674 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 HMGN4O00479 90 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 PPOXP50336 477 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 EPS8Q12929 822 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 CHI3L2Q15782 390 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 SWI5Q1ZZU3 235 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 SPANXN4Q5MJ08 99 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 FAM120AOSQ5T036 256 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 MRPL2Q5T653 305 aaKnown RBP18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 ZNF621Q6ZSS3 439 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 OLIG3Q7RTU3 272 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 NEU4Q8WWR8 484 aaPredicted RBP18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 C19orf24Q9BVV8 132 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 ADPRHL2Q9NX46 363 aa18.37■□□□□ 0.53
SQSTM1-210ENST00000506042 LIPT2A6NK58 231 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 AP3D1O14617 1153 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 TM9SF1O15321 606 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 AKR7A3O95154 331 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 AHSA1O95433 338 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 TGFAP01135 160 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 IMPDH2P12268 514 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 CHN2P52757 468 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 CRISP3P54108 245 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 TBRG1Q3YBR2 411 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 PRAMEF8Q5VWM4 474 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 PRAMEF7Q5VXH5 474 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 ANKRD16Q6P6B7 361 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 CCDC36Q8IYA8 594 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 CADM2Q8N3J6 435 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 ZNF781Q8N8C0 355 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 GLB1L3Q8NCI6 653 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 ANKK1Q8NFD2 765 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 IL17RDQ8NFM7 739 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 MAGEE2Q8TD90 523 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 OR52E6Q96RD3 313 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 SLC38A1Q9H2H9 487 aa18.36■□□□□ 0.53
SQSTM1-210ENST00000506042 ANP32DO95626 131 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 ZNF23P17027 643 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 IGFBP5P24593 272 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 SLC1A6P48664 564 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 IDH3GP51553 393 aaPredicted RBP18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 FUT5Q11128 374 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 EFNB3Q15768 340 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 SYPL1Q16563 259 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 HIKESHIQ53FT3 197 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 RFLNBQ8N5W9 214 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 TMEM99Q8N816 258 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 FAM169BQ8N8A8 192 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 OR1K1Q8NGR3 316 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 SORCS2Q96PQ0 1159 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 ADAM19Q9H013 955 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 DYNLRB1Q9NP97 96 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 STAB1Q9NY15 2570 aa18.35■□□□□ 0.53
SQSTM1-210ENST00000506042 ARPC4-TTLL3A0A0A6YYG9 625 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 CLDN24A6NM45 220 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 VWC2LB2RUY7 222 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 KLF11O14901 512 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 OR4A8P0C604 315 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 NTF4P34130 210 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 SRP14P37108 136 aaKnown RBP18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 FOXG1P55316 489 aaPredicted RBP18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 KRTAP24-1Q3LI83 254 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 OGFOD2Q6N063 350 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 C5orf46Q6UWT4 87 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 ANKFN1Q8N957 763 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 OR52P1PQ8NH57 321 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 HPS1Q92902 700 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 ZG16BQ96DA0 208 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 LINC00470Q9BZP3 86 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 RMND5AQ9H871 391 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 IFT52Q9Y366 437 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 PLCE1Q9P212 2302 aa18.34■□□□□ 0.53
SQSTM1-210ENST00000506042 IGHV1-18A0A0C4DH31 117 aa18.33■□□□□ 0.52
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