RNA–Protein interactions for RNA: ENST00000505746.1

PDLIM7-214, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-214ENST00000505746 RLIMQ9NVW2 624 aa10.59□□□□□ -0.71
PDLIM7-214ENST00000505746 NKIRAS1Q9NYS0 192 aa10.59□□□□□ -0.71
PDLIM7-214ENST00000505746 ZIM2Q9NZV7 527 aa10.59□□□□□ -0.71
PDLIM7-214ENST00000505746 DSPPQ9NZW4 1301 aa10.58□□□□□ -0.71
PDLIM7-214ENST00000505746 A0A096LPI6 279 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 A0A0G2JPF8 293 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 LIPT2A6NK58 231 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 AQP7P3A6NL99 342 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 A8MVM7 634 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 HNRNPCL2B2RXH8 293 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 HNRNPCL3B7ZW38 293 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 UBDO15205 165 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 CD5LO43866 347 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 HNRNPCL1O60812 293 aaKnown RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 AKR7A3O95154 331 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 VAMP5O95183 116 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 WNT11O96014 354 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 BCHEP06276 602 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 HNRNPCL4P0DMR1 293 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 ETFAP13804 333 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 NCF2P19878 526 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 MPGP29372 298 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 ACAA2P42765 397 aaKnown RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 MVDP53602 400 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 FOXG1P55316 489 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 PRPS1P60891 318 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 IRX1P78414 480 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 CHRNB3Q05901 458 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 SPOCK1Q08629 439 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 OR7A5Q15622 319 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 MAPK11Q15759 364 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 RNF220Q5VTB9 566 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 C9orf135Q5VTT2 229 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 C11orf71Q6IPW1 123 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 CLEC2AQ6UVW9 174 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 ZNF836Q6ZNA1 936 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 GPAT4Q86UL3 456 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 CADM2Q8N3J6 435 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 TMEM99Q8N816 258 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 OR9K2Q8NGE7 335 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 SLC38A5Q8WUX1 472 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 SDR39U1Q9NRG7 319 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 SLC6A13Q9NSD5 602 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 ADAM21Q9UKJ8 722 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 ZNF443Q9Y2A4 671 aaPredicted RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 IFT52Q9Y366 437 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 ATP23Q9Y6H3 246 aa10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 FN1P02751 2386 aaKnown RBP10.58□□□□□ -0.72
PDLIM7-214ENST00000505746 NSD1Q96L73 2696 aaPredicted RBP10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 H7C417 338 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 KRT33AO76009 404 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 PAX7P23759 505 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 APOBEC3AP31941 199 aaPredicted RBP10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 POLR2JP52435 117 aaKnown RBP10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 SLC9B1Q4ZJI4 515 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 C6orf10Q5SRN2 563 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 MIER2Q8N344 545 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 GOLGA6L1Q8N7Z2 621 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 ZIC4Q8N9L1 334 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 OR10H5Q8NGA6 315 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 AURKBQ96GD4 344 aaPredicted RBP10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 BOD1Q96IK1 185 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 MDFIQ99750 246 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 SPATA9Q9BWV2 254 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 RAD21L1Q9H4I0 556 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 OBP2BQ9NPH6 170 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 YAE1D1Q9NRH1 226 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 TMEM45AQ9NWC5 275 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 ADPRHL2Q9NX46 363 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 PMF1-BGLAPU3KQ54 211 aa10.57□□□□□ -0.72
PDLIM7-214ENST00000505746 HIVEP2P31629 2446 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 OR6C65A6NJZ3 312 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 KLF11O14901 512 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 CDH2P19022 906 aaPredicted RBP10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 MAGOHP61326 146 aaKnown RBP10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 BNIP2Q12982 314 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 ZNF311Q5JNZ3 666 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 RPS26P11Q5JNZ5 115 aaPredicted RBP10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 C1orf140Q5VVS0 124 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 PRAMEF8Q5VWM4 474 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 PRAMEF7Q5VXH5 474 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 B3GLCTQ6Y288 498 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 CLIP4Q8N3C7 705 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 STK35Q8TDR2 534 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 SLC35B4Q969S0 331 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 TMEM19Q96HH6 336 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 ZNF385AQ96PM9 386 aaKnown RBP10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 RASD1Q9Y272 281 aa10.56□□□□□ -0.72
PDLIM7-214ENST00000505746 ROS1P08922 2347 aa10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 NUP214P35658 2090 aaPredicted RBP10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 IGHV4-30-2A0A087WSY4 118 aa10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 ELOA3DA6NLF2 546 aaPredicted RBP10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 A8MV72 311 aaPredicted RBP10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 ZNF587BE7ETH6 402 aa10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 CLIC1O00299 241 aa10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 FRS3O43559 492 aa10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 AHSA1O95433 338 aa10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 IFNA2P01563 188 aa10.55□□□□□ -0.72
PDLIM7-214ENST00000505746 PRG2P13727 222 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms