RNA–Protein interactions for RNA: ENST00000504751.5

TRAPPC13-206, Transcript of trafficking protein particle complex 13, humanhuman

TSL 4

Gene TRAPPC13, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-206ENST00000504751 LRRC75A-AS1Q8N1F1 130 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 SUMF2Q8NBJ7 301 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 FBXO30Q8TB52 745 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 MYDGFQ969H8 173 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 UBE2E3Q969T4 207 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 MRPL45Q9BRJ2 306 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 VCX2Q9H322 139 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 NXF3Q9H4D5 531 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 SLC25A22Q9H936 323 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 NHEJ1Q9H9Q4 299 aaPredicted RBP3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 NANOGQ9H9S0 305 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 ADAM28Q9UKQ2 775 aa3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 PRRC2AP48634 2157 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 TDRD6O60522 2096 aaKnown RBP3.66□□□□□ -1.82
TRAPPC13-206ENST00000504751 PINLYPA6NC86 204 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 LOC110117498-PIK3R3F6TDL0 507 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 ZNF208O43345 1280 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 MED7O43513 233 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 NCK1P16333 377 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 GNA11P29992 359 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 KPNA2P52292 529 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 PRPS1P60891 318 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 DUSP7Q16829 419 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 LRRC23Q53EV4 343 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 DMRTC1Q5HYR2 192 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 TIGD3Q6B0B8 471 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 PMF1Q6P1K2 205 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 ZNF530Q6P9A1 599 aaPredicted RBP3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 RDH5Q92781 318 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 UFD1Q92890 307 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 UCN3Q969E3 161 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 OXGR1Q96P68 337 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 MBOAT4Q96T53 435 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 P2RY13Q9BPV8 354 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 NT5C3AQ9H0P0 336 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 DCAF16Q9NXF7 216 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 HOXC10Q9NYD6 342 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 MTRF1LQ9UGC7 380 aaKnown RBP3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 CDH9Q9ULB4 789 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 CLEC4AQ9UMR7 237 aa3.65□□□□□ -1.83
TRAPPC13-206ENST00000504751 RPAP1Q9BWH6 1393 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 TCRBV9S1A1TA0A576 114 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 TRIM49D1C9J1S8 452 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 CXCL11O14625 94 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 FAM189A1O60320 539 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 ZNF853P0CG23 659 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 CCDC130P13994 396 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 PRDX3P30048 256 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 ATP1B3P54709 279 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 DLX1P56177 255 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 GPNMBQ14956 572 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 KLHL38Q2WGJ6 581 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 PAGE3Q5JUK9 113 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 SAMD4BQ5PRF9 694 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 DHDDSQ86SQ9 333 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 SLC26A11Q86WA9 606 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 CCDC65Q8IXS2 484 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 ZNF679Q8IYX0 411 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 ZCCHC7Q8N3Z6 543 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 PNKDQ8N490 385 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 RNF138Q8WVD3 245 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 FAM151AQ8WW52 585 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 CMTM7Q96FZ5 175 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 TIMD4Q96H15 378 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 ZNF414Q96IQ9 312 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 RPRD1AQ96P16 312 aaPredicted RBP3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 RBM14Q96PK6 669 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 CLCC1Q96S66 551 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 PLGRKTQ9HBL7 147 aa3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 THUMPD1Q9NXG2 353 aaKnown RBP3.64□□□□□ -1.83
TRAPPC13-206ENST00000504751 PLEKHH1Q9ULM0 1364 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 A0A0G2JLM5 398 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 IQANK1A0A1B0GTG1 560 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 A8MXQ7 604 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 HSD17B6O14756 317 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 INSP01308 110 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 IL1BP01584 269 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 P04436 131 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 KLK3P07288 261 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 CHTF8P0CG12 524 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 NR2C1P13056 603 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 MDKP21741 143 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 CCR1P32246 355 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 OPRD1P41143 372 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 MAGEA8P43361 318 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 ZNF133P52736 654 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 TAS2R19P59542 299 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 CDK16Q00536 496 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 OXA1LQ15070 435 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 MICBQ29980 383 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 CENPPQ6IPU0 288 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 TMIGD1Q6UXZ0 262 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 HSDL2Q6YN16 418 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 RNF175Q8N4F7 328 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 OR52H1Q8NGJ2 320 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 OR9G1Q8NH87 305 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 MAGEE2Q8TD90 523 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 ARPC1AQ92747 370 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 KCNA7Q96RP8 456 aa3.63□□□□□ -1.83
TRAPPC13-206ENST00000504751 NRTNQ99748 197 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms