RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CLDN9O95484 217 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 HLA-HP01893 362 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 RPS19P39019 145 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SLURP1P55000 103 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 RAB10P61026 200 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CDR2Q01850 454 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 EFEMP1Q12805 493 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ACSF3Q4G176 576 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 TIGD2Q4W5G0 525 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CARD16Q5EG05 197 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PIGGQ5H8A4 983 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PRMT9Q6P2P2 845 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 FAM122CQ6P4D5 195 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 LIMS2Q7Z4I7 341 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 DPPA2Q7Z7J5 298 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 TMEM17Q86X19 198 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ARHGEF19Q8IW93 802 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 RIBC1Q8N443 379 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 GTF3AQ92664 365 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 FLYWCH2Q96CP2 140 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 YIPF6Q96EC8 236 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 RITA1Q96K30 269 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CNN2Q99439 309 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SEC22CQ9BRL7 303 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 APOOQ9BUR5 198 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PIGUQ9H490 435 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ALG9Q9H6U8 611 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 UGT1A7Q9HAW7 530 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SYBUQ9NX95 663 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SLC17A4Q9Y2C5 497 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ALG6Q9Y672 507 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 GOSR2O14653 212 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CHEK1O14757 476 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SNAPINO95295 136 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PRKCGP05129 697 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CD5P06127 495 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SLC2A1P11166 492 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 RPL13AP40429 203 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 MAGEA3P43357 314 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 GYG1P46976 350 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SERPINB8P50452 374 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF45Q02386 682 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SF3A2Q15428 464 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CCDC153Q494R4 210 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 BEND3Q5T5X7 828 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 LRRC31Q6UY01 552 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 TMPRSS11AQ6ZMR5 421 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SLC35F2Q8IXU6 374 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 NECAP1Q8NC96 275 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 C11orf45Q8TAV5 145 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SLC6A7Q99884 636 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PRRT1Q99946 306 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SLC22A4Q9H015 551 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 GAREM1Q9H706 876 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SMYD3Q9H7B4 428 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 B3GAT2Q9NPZ5 323 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 XPNPEP1Q9NQW7 623 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 C19orf12Q9NSK7 152 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 C1orf109Q9NX04 203 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PACSIN3Q9UKS6 424 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ERVW-1Q9UQF0 538 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 AK6Q9Y3D8 172 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SMCHD1A6NHR9 2005 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 DIRC3C9JPN6 131 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PLEKHA8P1O95397 391 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CRYABP02511 175 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ATP1A1P05023 1023 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 GRPRP30550 384 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 DAP3P51398 398 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 CX3CL1P78423 397 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 MTF1Q14872 753 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ATXN7L3Q14CW9 347 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 INPP5JQ15735 1006 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 PRTGQ2VWP7 1150 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 TRMT5Q32P41 509 aaKnown RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 SLC22A6Q4U2R8 563 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ACTL10Q5JWF8 245 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 COX8CQ7Z4L0 72 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 OR9Q2Q8NGE9 314 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 TMEM19Q96HH6 336 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ILKAPQ9H0C8 392 aaPredicted RBP4.58□□□□□ -1.68
NIPBL-204ENST00000504430 TPK1Q9H3S4 243 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 USE1Q9NZ43 259 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF319Q9P2F9 582 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 B4GALT7Q9UBV7 327 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 R4GN57 208 aa4.58□□□□□ -1.68
NIPBL-204ENST00000504430 NSG1A0A0A6YYJ2 146 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 TEX51A0A1B0GUA7 166 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 ACOT8O14734 319 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 AP2A2O94973 939 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 MPZL1O95297 269 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 MYOD1P15172 320 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 CXCR2P25025 360 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 NSG1P42857 185 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 GLP1RP43220 463 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 CLDN17P56750 224 aa4.57□□□□□ -1.68
NIPBL-204ENST00000504430 RANP62826 216 aaKnown RBP4.57□□□□□ -1.68
NIPBL-204ENST00000504430 CKAP4Q07065 602 aaKnown RBP4.57□□□□□ -1.68
NIPBL-204ENST00000504430 GPR17Q13304 367 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms