RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 TMEM99Q8N816 258 aa15.04■□□□□ -0
SMC4-226ENST00000497311 MAELQ96JY0 434 aaKnown RBP15.04■□□□□ -0
SMC4-226ENST00000497311 TAPBPLQ9BX59 468 aa15.04■□□□□ -0
SMC4-226ENST00000497311 RMND5AQ9H871 391 aa15.04■□□□□ -0
SMC4-226ENST00000497311 FKRPQ9H9S5 495 aa15.04■□□□□ -0
SMC4-226ENST00000497311 TPT1P8Q9HAU6 139 aa15.04■□□□□ -0
SMC4-226ENST00000497311 ZIM2Q9NZV7 527 aa15.04■□□□□ -0
SMC4-226ENST00000497311 DSPPQ9NZW4 1301 aa15.03■□□□□ -0
SMC4-226ENST00000497311 TMEM247A6NEH6 219 aa15.03■□□□□ -0
SMC4-226ENST00000497311 AQP7P3A6NL99 342 aa15.03■□□□□ -0
SMC4-226ENST00000497311 ACAA2P42765 397 aaKnown RBP15.03■□□□□ -0
SMC4-226ENST00000497311 DSTNP60981 165 aa15.03■□□□□ -0
SMC4-226ENST00000497311 LARS2Q15031 903 aaKnown RBP15.03■□□□□ -0
SMC4-226ENST00000497311 ZSWIM7Q19AV6 140 aa15.03■□□□□ -0
SMC4-226ENST00000497311 SLC9B1Q4ZJI4 515 aa15.03■□□□□ -0
SMC4-226ENST00000497311 C1QTNF12Q5T7M4 302 aa15.03■□□□□ -0
SMC4-226ENST00000497311 AGBL2Q5U5Z8 902 aa15.03■□□□□ -0
SMC4-226ENST00000497311 RNF220Q5VTB9 566 aa15.03■□□□□ -0
SMC4-226ENST00000497311 ZNF544Q6NX49 715 aa15.03■□□□□ -0
SMC4-226ENST00000497311 CLEC2AQ6UVW9 174 aa15.03■□□□□ -0
SMC4-226ENST00000497311 B3GLCTQ6Y288 498 aa15.03■□□□□ -0
SMC4-226ENST00000497311 AAED1Q7RTV5 226 aa15.03■□□□□ -0
SMC4-226ENST00000497311 GPAT4Q86UL3 456 aa15.03■□□□□ -0
SMC4-226ENST00000497311 POMGNT2Q8NAT1 580 aa15.03■□□□□ -0
SMC4-226ENST00000497311 OR9K2Q8NGE7 335 aa15.03■□□□□ -0
SMC4-226ENST00000497311 SLC38A5Q8WUX1 472 aa15.03■□□□□ -0
SMC4-226ENST00000497311 ITCHQ96J02 903 aa15.03■□□□□ -0
SMC4-226ENST00000497311 PIF1Q9H611 641 aa15.03■□□□□ -0
SMC4-226ENST00000497311 MANSC1Q9H8J5 431 aa15.03■□□□□ -0
SMC4-226ENST00000497311 CACYBPQ9HB71 228 aaKnown RBP15.03■□□□□ -0
SMC4-226ENST00000497311 YAE1D1Q9NRH1 226 aa15.03■□□□□ -0
SMC4-226ENST00000497311 THUMPD1Q9NXG2 353 aaKnown RBP15.03■□□□□ -0
SMC4-226ENST00000497311 ZNF232Q9UNY5 417 aa15.03■□□□□ -0
SMC4-226ENST00000497311 ZNF443Q9Y2A4 671 aaPredicted RBP15.03■□□□□ -0
SMC4-226ENST00000497311 ATP23Q9Y6H3 246 aa15.03■□□□□ -0
SMC4-226ENST00000497311 RTTNQ86VV8 2226 aa15.02■□□□□ -0
SMC4-226ENST00000497311 IGHV4-30-2A0A087WSY4 118 aa15.02■□□□□ -0
SMC4-226ENST00000497311 FAM234BA2RU67 622 aa15.02■□□□□ -0
SMC4-226ENST00000497311 A8MVM7 634 aa15.02■□□□□ -0
SMC4-226ENST00000497311 WNT11O96014 354 aa15.02■□□□□ -0
SMC4-226ENST00000497311 TFPTP0C1Z6 253 aa15.02■□□□□ -0
SMC4-226ENST00000497311 NCF2P19878 526 aaPredicted RBP15.02■□□□□ -0
SMC4-226ENST00000497311 DSCR9P59020 149 aa15.02■□□□□ -0
SMC4-226ENST00000497311 PRPS1P60891 318 aa15.02■□□□□ -0
SMC4-226ENST00000497311 BNIP2Q12982 314 aa15.02■□□□□ -0
SMC4-226ENST00000497311 TMEM225Q6GV28 225 aa15.02■□□□□ -0
SMC4-226ENST00000497311 KLHL24Q6TFL4 600 aa15.02■□□□□ -0
SMC4-226ENST00000497311 MSANTD1Q6ZTZ1 278 aa15.02■□□□□ -0
SMC4-226ENST00000497311 ABHD12BQ7Z5M8 362 aaPredicted RBP15.02■□□□□ -0
SMC4-226ENST00000497311 ZIC4Q8N9L1 334 aa15.02■□□□□ -0
SMC4-226ENST00000497311 ZNF385AQ96PM9 386 aaKnown RBP15.02■□□□□ -0
SMC4-226ENST00000497311 ARMC7Q9H6L4 198 aa15.02■□□□□ -0
SMC4-226ENST00000497311 SDR39U1Q9NRG7 319 aaPredicted RBP15.02■□□□□ -0
SMC4-226ENST00000497311 ARGLU1Q9NWB6 273 aaPredicted RBP15.02■□□□□ -0
SMC4-226ENST00000497311 ADPRHL2Q9NX46 363 aa15.02■□□□□ -0
SMC4-226ENST00000497311 NKIRAS1Q9NYS0 192 aa15.02■□□□□ -0
SMC4-226ENST00000497311 A0A096LPI6 279 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 A0A0G2JPF8 293 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 HNRNPCL2B2RXH8 293 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 HNRNPCL3B7ZW38 293 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 UBDO15205 165 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 HNRNPCL1O60812 293 aaKnown RBP15.01□□□□□ -0.01
SMC4-226ENST00000497311 KRT33AO76009 404 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 VAMP5O95183 116 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 HNRNPCL4P0DMR1 293 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 BMP4P12644 408 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 H2AFXP16104 143 aaPredicted RBP15.01□□□□□ -0.01
SMC4-226ENST00000497311 CDH2P19022 906 aaPredicted RBP15.01□□□□□ -0.01
SMC4-226ENST00000497311 POLR2JP52435 117 aaKnown RBP15.01□□□□□ -0.01
SMC4-226ENST00000497311 SLC25A3Q00325 362 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 CHRNB3Q05901 458 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 GTDC1Q4AE62 458 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 RPS26P11Q5JNZ5 115 aaPredicted RBP15.01□□□□□ -0.01
SMC4-226ENST00000497311 C6orf10Q5SRN2 563 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 CLIP4Q8N3C7 705 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 OR10H5Q8NGA6 315 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 HTRA1Q92743 480 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 AURKBQ96GD4 344 aaPredicted RBP15.01□□□□□ -0.01
SMC4-226ENST00000497311 TMEM19Q96HH6 336 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 SPATA9Q9BWV2 254 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 IFT52Q9Y366 437 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 ATRQ13535 2644 aa15.01□□□□□ -0.01
SMC4-226ENST00000497311 H7C417 338 aa15□□□□□ -0.01
SMC4-226ENST00000497311 FRS3O43559 492 aa15□□□□□ -0.01
SMC4-226ENST00000497311 PRG2P13727 222 aa15□□□□□ -0.01
SMC4-226ENST00000497311 APOBEC3AP31941 199 aaPredicted RBP15□□□□□ -0.01
SMC4-226ENST00000497311 C1orf140Q5VVS0 124 aa15□□□□□ -0.01
SMC4-226ENST00000497311 CXXC5Q7LFL8 322 aaKnown RBP15□□□□□ -0.01
SMC4-226ENST00000497311 HDXQ7Z353 690 aa15□□□□□ -0.01
SMC4-226ENST00000497311 MAVSQ7Z434 540 aa15□□□□□ -0.01
SMC4-226ENST00000497311 MIER2Q8N344 545 aa15□□□□□ -0.01
SMC4-226ENST00000497311 OR9I1Q8NGQ6 314 aa15□□□□□ -0.01
SMC4-226ENST00000497311 VPS33AQ96AX1 596 aa15□□□□□ -0.01
SMC4-226ENST00000497311 OR52B2Q96RD2 323 aa15□□□□□ -0.01
SMC4-226ENST00000497311 TMEM45AQ9NWC5 275 aa15□□□□□ -0.01
SMC4-226ENST00000497311 PMF1-BGLAPU3KQ54 211 aa15□□□□□ -0.01
SMC4-226ENST00000497311 COL6A5A8TX70 2615 aa15□□□□□ -0.01
SMC4-226ENST00000497311 ELOA3DA6NLF2 546 aaPredicted RBP14.99□□□□□ -0.01
SMC4-226ENST00000497311 A8MV72 311 aaPredicted RBP14.99□□□□□ -0.01
SMC4-226ENST00000497311 KLF11O14901 512 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms