RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 LOC100506127A0A0U1RQW1 187 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 RRP8O43159 456 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 DLGAP3O95886 979 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 IGKV1D-16P01601 117 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 COX6A1P12074 109 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 MAPK3P27361 379 aaPredicted RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 HTR2AP28223 471 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 NBL1P41271 181 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 WNT4P56705 351 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 IL10RAQ13651 578 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 MAPK11Q15759 364 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 TMPRSS9Q7Z410 1059 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 LUZP2Q86TE4 346 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ATG4DQ86TL0 474 aaPredicted RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 SLC22A16Q86VW1 577 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ZNF321PQ8N8H1 164 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 OR6N1Q8NGY5 312 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 SNIP1Q8TAD8 396 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 ELP5Q8TE02 316 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 MUL1Q969V5 352 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 KLHL15Q96M94 604 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 DUSP21Q9H596 190 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 CHST11Q9NPF2 352 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 KLHL1Q9NR64 748 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 TOR4AQ9NXH8 423 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 OSGIN1Q9UJX0 560 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 MCTS1Q9ULC4 181 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 PDCD5O14737 125 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 SLC6A19Q695T7 634 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 GPR119Q8TDV5 335 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 APOBEC4Q8WW27 367 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 ASB17Q8WXJ9 295 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 LIN28AQ9H9Z2 209 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 LAMP5Q9UJQ1 280 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 GTF2A1LQ9UNN4 478 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ARHGEF9O43307 516 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 BCAS1O75363 584 aaPredicted RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 APOC1P02654 83 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 POLR2IP36954 125 aaKnown RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 SLC35A2P78381 396 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ZNF74Q16587 644 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 PRAMEF20Q5VT98 475 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ZNF385CQ66K41 422 aaPredicted RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 C1GALT1C1Q96EU7 318 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 TMEM41AQ96HV5 264 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 ARHGEF17Q96PE2 2063 aaPredicted RBP7.63□□□□□ -1.19
USP54-215ENST00000497106 LRFN3Q9BTN0 628 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 NUAK2Q9H093 628 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 LRFN1Q9P244 771 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 HS3ST3B1Q9Y662 390 aa7.63□□□□□ -1.19
USP54-215ENST00000497106 CDX4O14627 284 aaPredicted RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 ARPC3O15145 178 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 FADS1O60427 444 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 IGHG1P01857 330 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 C1QCP02747 245 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ZNF17P17021 662 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 GRPRP30550 384 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ACAA2P42765 397 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 ALDH3B2P48448 385 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 P4HA3Q7Z4N8 544 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 CROCCP3Q8IVE0 287 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SUMF1Q8NBK3 374 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 NFAM1Q8NET5 270 aaPredicted RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 MGLLQ99685 303 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 BARD1Q99728 777 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 KATNB1Q9BVA0 655 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 PRR14Q9BWN1 585 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 CDCA4Q9BXL8 241 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ISYNA1Q9NPH2 558 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 PRELID1Q9Y255 219 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 NTNG1Q9Y2I2 539 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SPAARA0A1B0GVQ0 90 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 HSPB2A8KAH6 182 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 KDM4EB2RXH2 506 aaPredicted RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 ARL6IP5O75915 188 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SDHAP31040 664 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SRD5A2P31213 254 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 TALDO1P37837 337 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 MLLT10P55197 1068 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 DEFA1P59665 94 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 DEFA3P59666 94 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ERVK-25P63136 954 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 GLO1Q04760 184 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 PUDPQ08623 228 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 HSPB2Q16082 182 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 TSTQ16762 297 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 CNPY1Q3B7I2 92 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SLC18B1Q6NT16 456 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SLC35F2Q8IXU6 374 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ZADH2Q8N4Q0 377 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ZNF441Q8N8Z8 693 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 ZNF454Q8N9F8 522 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 FAM71CQ8NEG0 241 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 KCTD7Q96MP8 289 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 WDR12Q9GZL7 423 aaKnown RBP7.62□□□□□ -1.19
USP54-215ENST00000497106 FAM86C1Q9NVL1 165 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SIGLEC7Q9Y286 467 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 H3BMH7 237 aa7.62□□□□□ -1.19
USP54-215ENST00000497106 SURF4O15260 269 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms