RNA–Protein interactions for RNA: ENST00000496447.5

PTPRF-215, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 5,887 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-215ENST00000496447 CYB561P49447 251 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 ZNF616Q08AN1 781 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 EXT1Q16394 746 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 ACSM3Q53FZ2 586 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 OR1J2Q8NGS2 313 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 SPIN2AQ99865 258 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 SPIN2BQ9BPZ2 258 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 IGLV3-10A0A075B6K4 115 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 OR5K3A6NET4 321 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 FAM183AA6NL82 134 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 M6PRP20645 277 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 CRHBPP24387 322 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 DBPQ10586 325 aaPredicted RBP12.21□□□□□ -0.45
PTPRF-215ENST00000496447 C1QTNF12Q5T7M4 302 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 CADM3Q8N126 398 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 OR13C2Q8NGS9 318 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 OR1E3Q8WZA6 343 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 C3orf49Q96BT1 292 aa12.21□□□□□ -0.45
PTPRF-215ENST00000496447 SMIM18P0DKX4 95 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 CAMK2DQ13557 499 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 C12orf45Q8N5I9 185 aaPredicted RBP12.21□□□□□ -0.46
PTPRF-215ENST00000496447 SLC37A2Q8TED4 501 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 KIR3DX1Q9H7L2 352 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 ANKRD10Q9NXR5 420 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 PCDHGA8Q9Y5G5 932 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 TXNL1O43396 289 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 RAB3DO95716 219 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 OR8U9P0C7N5 309 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 SLC35E2P0CK97 266 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 SRFP11831 508 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 OXA1LQ15070 435 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 HACD4Q5VWC8 232 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 INPP5EQ9NRR6 644 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 HAO2Q9NYQ3 351 aa12.21□□□□□ -0.46
PTPRF-215ENST00000496447 A0A0G2JMP0 313 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 DVL2O14641 736 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 MTHFD2P13995 350 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 MAOAP21397 527 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 CAV2P51636 162 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 NKX6-1P78426 367 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 SPOCK1Q08629 439 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 SLC36A2Q495M3 483 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 MTFR2Q6P444 385 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ADGRG5Q8IZF4 528 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 OR4M2Q8NGB6 313 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 MAFAQ8NHW3 353 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 CDCP1Q9H5V8 836 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 FGF22Q9HCT0 170 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 LSM5Q9Y4Y9 91 aaKnown RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 TIAM2Q8IVF5 1701 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 TMED7-TICAM2A0A0A6YYA0 188 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 J3KTA2 159 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 CTNSO60931 367 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 PRKRAO75569 313 aaKnown RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 BCL6P41182 706 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 RPP30P78346 268 aaKnown RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 TATDN3Q17R31 274 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 FOXB2Q5VYV0 432 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 KIAA1211LQ6NV74 962 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ANKRD53Q8N9V6 530 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 SYNPRQ8TBG9 265 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 RSPRY1Q96DX4 576 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 TMED7Q9Y3B3 224 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 GOSR2O14653 212 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 SHOXO15266 292 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 SC5DO75845 299 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ETV5P41161 510 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF529Q6P280 563 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 UBALD2Q8IYN6 164 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF740Q8NDX6 193 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 THOC3Q96J01 351 aaKnown RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 UBXN10Q96LJ8 280 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 VRK1Q99986 396 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF649Q9BS31 505 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 NAA50Q9GZZ1 169 aaKnown RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ASF1BQ9NVP2 202 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 PPP1R14DQ9NXH3 145 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 MYH10P35580 1976 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 URB1O60287 2271 aaKnown RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 A0A1W2PQ09 198 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 ZNF736B4DX44 427 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 D6RAR5 112 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 SLCO2B1O94956 709 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 MT-CO2P00403 227 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 DRD5P21918 477 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 FLI1Q01543 452 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 CLPPQ16740 277 aaPredicted RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 HBMQ6B0K9 141 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 RNF113BQ8IZP6 322 aaKnown RBP12.2□□□□□ -0.46
PTPRF-215ENST00000496447 LURAP1Q96LR2 239 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 CACNG2Q9Y698 323 aa12.2□□□□□ -0.46
PTPRF-215ENST00000496447 BTAF1O14981 1849 aa12.19□□□□□ -0.46
PTPRF-215ENST00000496447 CSF1P09603 554 aa12.19□□□□□ -0.46
PTPRF-215ENST00000496447 EIF1P41567 113 aaKnown RBP12.19□□□□□ -0.46
PTPRF-215ENST00000496447 TAS2R31P59538 309 aa12.19□□□□□ -0.46
PTPRF-215ENST00000496447 MEX3BQ6ZN04 569 aaKnown RBP12.19□□□□□ -0.46
PTPRF-215ENST00000496447 OR8J2Q8NGG1 315 aa12.19□□□□□ -0.46
PTPRF-215ENST00000496447 CD300LBA8K4G0 201 aa12.19□□□□□ -0.46
PTPRF-215ENST00000496447 H0Y8X5 98 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms