RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 BTN3A2P78410 334 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TNFRSF17Q02223 184 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 PLGLB1Q02325 96 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 ID2Q02363 134 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 CBX3Q13185 183 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 EBPQ15125 230 aaKnown RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 C6orf10Q5SRN2 563 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 PRAMEF20Q5VT98 475 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TMIGD1Q6UXZ0 262 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 HSDL2Q6YN16 418 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 ZBTB49Q6ZSB9 765 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 MEPCEQ7L2J0 689 aaKnown RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 YTHDF3Q7Z739 585 aaKnown RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 ADAMTSL2Q86TH1 951 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 HIPK1Q86Z02 1210 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 CLYBLQ8N0X4 340 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TMEM156Q8N614 296 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 MORN4Q8NDC4 146 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TRIM58Q8NG06 486 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 OR2AK2Q8NG84 335 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 OR10G3Q8NGC4 313 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 OR14A16Q8NHC5 309 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 NUBPLQ8TB37 319 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TMEM163Q8TC26 289 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 PAQR8Q8TEZ7 354 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 UBTD2Q8WUN7 234 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 MAIP1Q8WWC4 291 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 ATL1Q8WXF7 558 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 ANKRD7Q92527 254 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 BCL2L2Q92843 193 aaPredicted RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 RNASE6Q93091 150 aaKnown RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 SLC25A28Q96A46 364 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 ANKRD9Q96BM1 317 aaPredicted RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 SPDL1Q96EA4 605 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 CAPZA3Q96KX2 299 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 MS4A8Q9BY19 250 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TOR3AQ9H497 397 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 RAD21L1Q9H4I0 556 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 LYRM4Q9HD34 91 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 MYNNQ9NPC7 610 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 LZTFL1Q9NQ48 299 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 PNO1Q9NRX1 252 aaKnown RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 HOMER3Q9NSC5 361 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TMEM45AQ9NWC5 275 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 MSRB1Q9NZV6 116 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 KLHL13Q9P2N7 655 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 B4GALT7Q9UBV7 327 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 FETUBQ9UGM5 382 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 FBXW2Q9UKT8 454 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 CHMP2BQ9UQN3 213 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 TEX264Q9Y6I9 313 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 DYNC2H1Q8NCM8 4307 aaKnown RBP3.79□□□□□ -1.8
VPS52-222ENST00000495981 MPDZO75970 2070 aa3.79□□□□□ -1.8
VPS52-222ENST00000495981 HERC2O95714 4834 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 MED12Q93074 2177 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 A0A0A6YYD5 115 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 TRGV5A0A0B4J1U4 118 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 ATP6AP2A0A1C7CYW4 349 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 MAGEB16A2A368 324 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 FAM90A10PA6NDY2 464 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 USP27XA6NNY8 438 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 C17orf105B2RV13 164 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 B4DXG7 233 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 FAM90A26D6RGX4 464 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 E7ESA3 106 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 SLC33A1O00400 549 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 PGRMC2O15173 223 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 TAPBPO15533 448 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 LDB3O75112 727 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 TRIM3O75382 744 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 ATP6AP2O75787 350 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 HIST1H2AGP0C0S8 130 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 C1GALT1C1LP0DN25 315 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 UROSP10746 265 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 GABRA1P14867 456 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 DDX5P17844 614 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 CNR1P21554 472 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 HIST1H1TP22492 207 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 MPZP25189 248 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 ATP5A1P25705 553 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 CEACAM8P31997 349 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 HNMTP50135 292 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 PLA2G16P53816 162 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 MTTPP55157 894 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 HNRNPH2P55795 449 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 NME5P56597 212 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 SELENOVP59797 346 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 STX1BP61266 288 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 SARNPP82979 210 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 NPRL3Q12980 569 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 HSPB3Q12988 150 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 UBE2V1Q13404 147 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 DAZAP2Q15038 168 aaPredicted RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 RBBP5Q15291 538 aaKnown RBP3.78□□□□□ -1.8
VPS52-222ENST00000495981 TGFBIQ15582 683 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 OR4D1Q15615 310 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 DECR1Q16698 335 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 FBXO48Q5FWF7 155 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 TRIM40Q6P9F5 258 aa3.78□□□□□ -1.8
VPS52-222ENST00000495981 BHLHB9Q6PI77 547 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms