RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CLEC18BQ6UXF7 455 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 PIWIL3Q7Z3Z3 882 aaKnown RBP15.29■□□□□ 0.04
HDAC6-235ENST00000495515 ZDHHC21Q8IVQ6 265 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 CLEC18CQ8NCF0 446 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 PIK3C3Q8NEB9 887 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 CA5BP1Q8WTZ4 195 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 TMEM239Q8WW34 195 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 SLC25A36Q96CQ1 311 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 PRSS27Q9BQR3 290 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 NMNAT1Q9HAN9 279 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-235ENST00000495515 C6orf203Q9P0P8 240 aaPredicted RBP15.29■□□□□ 0.04
HDAC6-235ENST00000495515 RHCGQ9UBD6 479 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 Q9UFV3 132 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 EMC9Q9Y3B6 208 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 MED31Q9Y3C7 131 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 CORINQ9Y5Q5 1042 aa15.29■□□□□ 0.04
HDAC6-235ENST00000495515 SETXQ7Z333 2677 aaKnown RBP15.28■□□□□ 0.04
HDAC6-235ENST00000495515 DHRS12A0PJE2 317 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 WIPF3A6NGB9 483 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 FFAR1O14842 300 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 SMAD9O15198 467 aaKnown RBP15.28■□□□□ 0.04
HDAC6-235ENST00000495515 CYTIPO60759 359 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 VAMP5O95183 116 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 MT-ATP6P00846 226 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 RAP2AP10114 183 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 RASGEF1BQ0VAM2 473 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 FOXD4Q12950 439 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-235ENST00000495515 OTUD3Q5T2D3 398 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-235ENST00000495515 C1orf146Q5VVC0 180 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 WDR88Q6ZMY6 472 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 RRM2BQ7LG56 351 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 CCDC71Q8IV32 467 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-235ENST00000495515 P3H2Q8IVL5 708 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 NKAIN4Q8IVV8 208 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 GCNT2Q8N0V5 402 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 ITLN2Q8WWU7 325 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-235ENST00000495515 TAAR8Q969N4 342 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 PTDSS2Q9BVG9 487 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 ASPNQ9BXN1 380 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 YY1AP1Q9H869 796 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 EMC3Q9P0I2 261 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 AURKCQ9UQB9 309 aa15.28■□□□□ 0.04
HDAC6-235ENST00000495515 UBR5O95071 2799 aaPredicted RBP15.28■□□□□ 0.04
HDAC6-235ENST00000495515 DOPEY2Q9Y3R5 2298 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 IGHV3-15A0A0B4J1V0 119 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 A0A1W2PRQ8 180 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 FTCDNL1E5RQL4 147 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 KPNA4O00629 521 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 GPR171O14626 319 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 SS18L1O75177 396 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 PRSS23O95084 383 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 AKR7A3O95154 331 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 IGF2P01344 180 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 MT-ND1P03886 318 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 H3F3AP84243 136 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 SRSF1Q07955 248 aaKnown RBP eCLIP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 DGCR6Q14129 220 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 PDK3Q15120 406 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 SLC25A35Q3KQZ1 300 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 TMEM201Q5SNT2 666 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 TMEM225Q6GV28 225 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 FAM214BQ7L5A3 538 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 MAMDC2Q7Z304 686 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 TSEN54Q7Z6J9 526 aaKnown RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 RNF113BQ8IZP6 322 aaKnown RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 CNEP1R1Q8N9A8 125 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 NAXEQ8NCW5 288 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 LILRB4Q8NHJ6 448 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 ABHD3Q8WU67 409 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 TMEM255BQ8WV15 326 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 ACOT11Q8WXI4 607 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 RSRC1Q96IZ7 334 aaKnown RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 RAB3IPQ96QF0 476 aaPredicted RBP15.27■□□□□ 0.04
HDAC6-235ENST00000495515 B3GALT5Q9Y2C3 310 aa15.27■□□□□ 0.04
HDAC6-235ENST00000495515 HIVEP3Q5T1R4 2406 aa15.27■□□□□ 0.03
HDAC6-235ENST00000495515 A0A1W2PNV4 684 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 AQP7P3A6NL99 342 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 KRT36O76013 467 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 DIRAS1O95057 198 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 CLDN14O95500 239 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 HIST1H2ABP04908 130 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 YES1P07947 543 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 PTNP21246 168 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 BMP5P22003 454 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 MAGEA2P43356 314 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 SPIBQ01892 262 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 IQCCQ4KMZ1 466 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 FGD3Q5JSP0 725 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 ABLIM2Q6H8Q1 611 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 ZNF730Q6ZMV8 503 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 H1FNTQ75WM6 255 aaPredicted RBP15.26■□□□□ 0.03
HDAC6-235ENST00000495515 HIST3H2AQ7L7L0 130 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 ADGRG5Q8IZF4 528 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 CDK20Q8IZL9 346 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 TMEM99Q8N816 258 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 SCAIQ8N9R8 606 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 HIST1H2ACQ93077 130 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 LRRC46Q96FV0 321 aa15.26■□□□□ 0.03
HDAC6-235ENST00000495515 SF3B5Q9BWJ5 86 aaKnown RBP15.26■□□□□ 0.03
HDAC6-235ENST00000495515 PIGMQ9H3S5 423 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms