RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TUSC5Q8IXB3 177 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 MCUR1Q96AQ8 359 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 STARD4Q96DR4 205 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 KTI12Q96EK9 354 aaPredicted RBP10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 PYURFQ96I23 114 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 LRGUKQ96M69 825 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 TMEM43Q9BTV4 400 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 FNDC11Q9BVV2 318 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 RBM24Q9BX46 236 aaKnown RBP10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 AMBRA1Q9C0C7 1298 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 C12orf49Q9H741 205 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 FANCFQ9NPI8 374 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 ACTR3BQ9P1U1 418 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 RIMS3Q9UJD0 308 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 FOXD3Q9UJU5 478 aaPredicted RBP10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 V9GYQ6 96 aa10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 SPTBN1Q01082 2364 aaKnown RBP10.78□□□□□ -0.68
CSNK1E-213ENST00000495232 INTS1Q8N201 2190 aaKnown RBP10.77□□□□□ -0.68
CSNK1E-213ENST00000495232 USP9YO00507 2555 aaPredicted RBP10.77□□□□□ -0.68
CSNK1E-213ENST00000495232 MPDZO75970 2070 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 GPR171O14626 319 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 MSTNO14793 375 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 NPIPB7O75200 414 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 VAMP5O95183 116 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 CD8BP10966 210 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 ITGA2P17301 1181 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 PTNP21246 168 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 YAP1P46937 504 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 CBX1P83916 185 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 H3F3AP84243 136 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 IL1RL1Q01638 556 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 BNIP1Q12981 228 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 TRIM25Q14258 630 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 PDK3Q15120 406 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 MTX3Q5HYI7 312 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 ABLIM2Q6H8Q1 611 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 CYP2R1Q6VVX0 501 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 LINC00114Q6XXX2 140 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 GALNT5Q7Z7M9 940 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 GPAT4Q86UL3 456 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 KIF18BQ86Y91 864 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 CCDC103Q8IW40 242 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 TMEM99Q8N816 258 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 RNASE6Q93091 150 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 TAAR8Q969N4 342 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 CCDC124Q96CT7 223 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 PRRC1Q96M27 445 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 HS6ST2Q96MM7 605 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 PSD2Q9BQI7 771 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 ASPNQ9BXN1 380 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 SLC19A3Q9BZV2 496 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 TRIM15Q9C019 465 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 KLHL4Q9C0H6 718 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 BCO1Q9HAY6 547 aa10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 NOSIPQ9Y314 301 aaKnown RBP10.77□□□□□ -0.69
CSNK1E-213ENST00000495232 ADGRG4Q8IZF6 3080 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 IGKV1D-42A0A075B6H8 117 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 AQP7P3A6NL99 342 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 ZNF724A8MTY0 619 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 A8MXE2 369 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 KPNA4O00629 521 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 DNAJC8O75937 253 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 MT-ATP6P00846 226 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 HIST1H2ABP04908 130 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 COX6B1P14854 86 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 NQO1P15559 274 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 KLK2P20151 261 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 CBLP22681 906 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 GRNP28799 593 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 PEX19P40855 299 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 RBM34P42696 430 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 TFF3Q07654 80 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 GUSBP1Q15486 140 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 EXOC3L2Q2M3D2 409 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 HIST3H2AQ7L7L0 130 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 RRM2BQ7LG56 351 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 ZNF100Q8IYN0 542 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 ZNF610Q8N9Z0 462 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 OR6S1Q8NH40 331 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 TMEM239Q8WW34 195 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 HIST1H2ACQ93077 130 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 POP5Q969H6 163 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 ZNF775Q96BV0 537 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 ASB9Q96DX5 294 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 CLPTM1LQ96KA5 538 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 PTDSS2Q9BVG9 487 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 SF3B5Q9BWJ5 86 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 OPN3Q9H1Y3 402 aaPredicted RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 PLSCR4Q9NRQ2 329 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 JKAMPQ9P055 326 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 A4GNTQ9UNA3 340 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 RASD1Q9Y272 281 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 CORINQ9Y5Q5 1042 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 SPTAN1Q13813 2472 aaKnown RBP10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 CACNA1CQ13936 2221 aa10.76□□□□□ -0.69
CSNK1E-213ENST00000495232 ICE1Q9Y2F5 2266 aa10.75□□□□□ -0.69
CSNK1E-213ENST00000495232 IGKV3D-15A0A087WSY6 115 aa10.75□□□□□ -0.69
CSNK1E-213ENST00000495232 FTCDNL1E5RQL4 147 aa10.75□□□□□ -0.69
CSNK1E-213ENST00000495232 J3KTA2 159 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms