RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SENP8Q96LD8 212 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 MCHR1Q99705 422 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 OMDQ99983 421 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 RHBGQ9H310 441 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 EHD1Q9H4M9 534 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 ISG20L2Q9H9L3 353 aaKnown RBP3.15□□□□□ -1.91
SMC4-224ENST00000494612 AIPL1Q9NZN9 384 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 TMEM9Q9P0T7 183 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 PTBP2Q9UKA9 531 aaKnown RBP3.15□□□□□ -1.91
SMC4-224ENST00000494612 KIF25-AS1Q9Y6Z4 181 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 CLSPNQ9HAW4 1339 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 AGRNO00468 2067 aa3.15□□□□□ -1.91
SMC4-224ENST00000494612 PALLDQ8WX93 1383 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 UBR3Q6ZT12 1888 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 MON2Q7Z3U7 1717 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 TOGARAM1Q9Y4F4 1720 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 KLLNB2CW77 178 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 B4DXG7 233 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 PRKYO43930 277 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 HCN1O60741 890 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 N4BP1O75113 896 aaKnown RBP3.14□□□□□ -1.91
SMC4-224ENST00000494612 MTX2O75431 263 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 LYPLA1O75608 230 aaPredicted RBP3.14□□□□□ -1.91
SMC4-224ENST00000494612 KRTAP1-4P0C5Y4 121 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 ATP6V1B2P21281 511 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 LEPP41159 167 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 RGRP47804 291 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 P2RY1P47900 373 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 PRKXP51817 358 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 EFNA3P52797 238 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 BIDP55957 195 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 ELAVL3Q14576 367 aaKnown RBP3.14□□□□□ -1.91
SMC4-224ENST00000494612 HERPUD1Q15011 391 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 CFAP157Q5JU67 520 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 SPATA46Q5T0L3 261 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 ATAD3BQ5T9A4 648 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 SMIM5Q71RC9 77 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 FAM220AQ7Z4H9 259 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 LCA5Q86VQ0 697 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 SKA3Q8IX90 412 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 ALLCQ8N6M5 410 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 ANKFN1Q8N957 763 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 OR4D9Q8NGE8 314 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 OR1F12Q8NHA8 337 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 B3GALT6Q96L58 329 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 PGLYRP4Q96LB8 373 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 TECTBQ96PL2 329 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 PLEKHF1Q96S99 279 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 SECISBP2Q96T21 854 aaKnown RBP3.14□□□□□ -1.91
SMC4-224ENST00000494612 MYCBPQ99417 103 aaPredicted RBP3.14□□□□□ -1.91
SMC4-224ENST00000494612 GAL3ST1Q99999 423 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 NICN1Q9BSH3 213 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 ZSCAN5AQ9BUG6 496 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 B3GNT2Q9NY97 397 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 ZNF256Q9Y2P7 627 aaPredicted RBP3.14□□□□□ -1.91
SMC4-224ENST00000494612 PXDNLA1KZ92 1463 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 KIF13BQ9NQT8 1826 aa3.14□□□□□ -1.91
SMC4-224ENST00000494612 KIAA1551Q9HCM1 1747 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 RGPD2P0DJD1 1756 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 C10orf71Q711Q0 1435 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 A0A1B0GUS0 222 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 A0A1B0GWB2 263 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 FAM231BA6NCW3 169 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 MPHOSPH10O00566 681 aaKnown RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 UGT2B17O75795 530 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 SLITRK3O94933 977 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 TIMP1P01033 207 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 FGF9P31371 208 aaPredicted RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 CD80P33681 288 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 LYZP61626 148 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 TAF7Q15545 349 aaPredicted RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 SLC25A52Q3SY17 297 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 SYT10Q6XYQ8 523 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 CCDC80Q76M96 950 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 MOB3BQ86TA1 216 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 C17orf82Q86X59 251 aaPredicted RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 ERI1Q8IV48 349 aaKnown RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 OR2L5Q8NG80 312 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 OR4D5Q8NGN0 318 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 OR56B4Q8NH76 319 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 TRMT10AQ8TBZ6 339 aaKnown RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 SLC5A11Q8WWX8 675 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 DCUN1D4Q92564 292 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 FGF11Q92914 225 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 TRIM44Q96DX7 344 aaPredicted RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 FAM122AQ96E09 287 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 TBX15Q96SF7 602 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 NAT10Q9H0A0 1025 aaKnown RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 VCPKMTQ9H867 229 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 GORASP2Q9H8Y8 452 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 PDFQ9HBH1 243 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 CD274Q9NZQ7 290 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 CELA1Q9UNI1 258 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 IFT52Q9Y366 437 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 AK6Q9Y3D8 172 aaKnown RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 ARFGEF1Q9Y6D6 1849 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 BRCA1P38398 1863 aaKnown RBP3.13□□□□□ -1.91
SMC4-224ENST00000494612 PCDH11XQ9BZA7 1347 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 MEGF6O75095 1541 aa3.13□□□□□ -1.91
SMC4-224ENST00000494612 ITGB4P16144 1822 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms