RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 CA10Q9NS85 328 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 TMEM45AQ9NWC5 275 aa8.41□□□□□ -1.06
UBR4-216ENST00000494503 IGHV1-18A0A0C4DH31 117 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 LOC390937A0A1W2PQ73 354 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 E9PBE3 544 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 HMGN4O00479 90 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 NR5A2O00482 541 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 ZNF208O43345 1280 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 ITM2AO43736 263 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 SNUPNO95149 360 aaKnown RBP8.4□□□□□ -1.06
UBR4-216ENST00000494503 GSNP06396 782 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 MYZAPP0CAP1 466 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 GKN3PP0CG01 181 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 CLNS1AP54105 237 aaKnown RBP8.4□□□□□ -1.06
UBR4-216ENST00000494503 LGALS3BPQ08380 585 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 SQLEQ14534 574 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 SLC17A1Q14916 467 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 CR1LQ2VPA4 569 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 TBRG1Q3YBR2 411 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 PRAMEF8Q5VWM4 474 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 PRAMEF7Q5VXH5 474 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 SAXO2Q658L1 398 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 ATG16L1Q676U5 607 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 RINLQ6ZS11 566 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 ZNF621Q6ZSS3 439 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 PEX5LQ8IYB4 626 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 ZNF540Q8NDQ6 660 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 MIPOL1Q8TD10 442 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 ZBTB9Q96C00 473 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 SLC25A36Q96CQ1 311 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 NEURL3Q96EH8 262 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 SNX18Q96RF0 628 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 NUF2Q9BZD4 464 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 RAB1BQ9H0U4 201 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 CENPHQ9H3R5 247 aa8.4□□□□□ -1.06
UBR4-216ENST00000494503 MYOZ1Q9NP98 299 aaPredicted RBP8.4□□□□□ -1.06
UBR4-216ENST00000494503 SVEP1Q4LDE5 3571 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 CCDC154A6NI56 674 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 AGAP5A6NIR3 686 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 LIPT2A6NK58 231 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 AQP7P3A6NL99 342 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 VSTM5A8MXK1 200 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 B9A039 149 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 hCG_2039718K7EN88 272 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 PDLIM1O00151 329 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 ANP32DO95626 131 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 C1QCP02747 245 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 DBIP07108 87 aaKnown RBP8.39□□□□□ -1.07
UBR4-216ENST00000494503 CHRM4P08173 479 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 NUDT17P0C025 328 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 DAOP14920 347 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 CREB1P16220 341 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 LBPP18428 481 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 APEX1P27695 318 aaKnown RBP8.39□□□□□ -1.07
UBR4-216ENST00000494503 SELENOPP49908 381 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 ABCE1P61221 599 aaKnown RBP8.39□□□□□ -1.07
UBR4-216ENST00000494503 H3F3AP84243 136 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 EPS8Q12929 822 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 CCNIQ14094 377 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 SWI5Q1ZZU3 235 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 DPY19L1Q2PZI1 675 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 SPATA21Q7Z572 469 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 CMIPQ8IY22 773 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 SVOPLQ8N434 492 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 OR1K1Q8NGR3 316 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 OIT3Q8WWZ8 545 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 TMEM45BQ96B21 275 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 TRNT1Q96Q11 434 aaKnown RBP8.39□□□□□ -1.07
UBR4-216ENST00000494503 OR52E6Q96RD3 313 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 ZBTB18Q99592 522 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 PAIP2Q9BPZ3 127 aaKnown RBP8.39□□□□□ -1.07
UBR4-216ENST00000494503 SAP130Q9H0E3 1048 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 OCEL1Q9H607 264 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 RLIMQ9NVW2 624 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 ASIC5Q9NY37 505 aa8.39□□□□□ -1.07
UBR4-216ENST00000494503 PRAMEF27A3QJZ7 478 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 TMEM247A6NEH6 219 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 OR6C65A6NJZ3 312 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 TCF21O43680 179 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 AHSA1O95433 338 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 SERPINE1P05121 402 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 BCHEP06276 602 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 CECR9P0C854 216 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 ZNF23P17027 643 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 CDKN2CP42773 168 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 CRATP43155 626 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 SLC1A6P48664 564 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 RPL14P50914 215 aaKnown RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 IDH3GP51553 393 aaPredicted RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 CHN2P52757 468 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 UFM1P61960 85 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 ROR2Q01974 943 aaKnown RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 NAAAQ02083 359 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 PLAURQ03405 335 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 C1DQ13901 141 aaKnown RBP8.38□□□□□ -1.07
UBR4-216ENST00000494503 CASP8Q14790 479 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 ADIPOQQ15848 244 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 SMU1Q2TAY7 513 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 MST1LQ2TV78 715 aa8.38□□□□□ -1.07
UBR4-216ENST00000494503 LIN52Q52LA3 116 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms