RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PCGF2P35227 344 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 GZMMP51124 257 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 MAP2K6P52564 334 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 SEC24CP53992 1094 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 GYS2P54840 703 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 RBBP4Q09028 425 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 ITGADQ13349 1161 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 CYLC2Q14093 348 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 MAPRE2Q15555 327 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 ALG10BQ5I7T1 473 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 C9orf135Q5VTT2 229 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 RBM45Q8IUH3 476 aaKnown RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 KDM8Q8N371 416 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 STEAP2Q8NFT2 490 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 OR4D11Q8NGI4 311 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 VANGL1Q8TAA9 524 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 SLC35B4Q969S0 331 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 TAMM41Q96BW9 452 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 RCN3Q96D15 328 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 KTI12Q96EK9 354 aaPredicted RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 PLPPR2Q96GM1 343 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 ZNF385AQ96PM9 386 aaKnown RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 PTDSS2Q9BVG9 487 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 FAM107BQ9H098 131 aa12.99□□□□□ -0.33
ATG4B-224ENST00000494132 TESQ9UGI8 421 aaKnown RBP12.99□□□□□ -0.33
ATG4B-224ENST00000494132 IGKV1D-42A0A075B6H8 117 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 A0A1W2PR80 420 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 PRORSD1PA6NEY8 169 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 AQP7P3A6NL99 342 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 CCT8L1PA6NM43 557 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 BBIP1A8MTZ0 92 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 GPR171O14626 319 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 FAPQ12884 760 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 SLC17A1Q14916 467 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 NPTX1Q15818 432 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 VMACQ2NL98 169 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 BEX5Q5H9J7 111 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 FBXW9Q5XUX1 488 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 LSMEM1Q8N8F7 131 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 OR9K2Q8NGE7 335 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 SLC26A7Q8TE54 656 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 NINJ1Q92982 152 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 ELAC2Q9BQ52 826 aaKnown RBP12.98□□□□□ -0.33
ATG4B-224ENST00000494132 ECSITQ9BQ95 431 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 TRIM2Q9C040 744 aa12.98□□□□□ -0.33
ATG4B-224ENST00000494132 GMPR2Q9P2T1 348 aaKnown RBP12.98□□□□□ -0.33
ATG4B-224ENST00000494132 A0A0B4J2E0 115 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 A0A1B0GX12 115 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 CPSF4LA6NMK7 179 aaKnown RBP12.97□□□□□ -0.33
ATG4B-224ENST00000494132 FTCDNL1E5RQL4 147 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 LGI1O95970 557 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 PNMTP11086 282 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 TNFRSF1BP20333 461 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 CD247P20963 164 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 P2RY4P51582 365 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 CRYBA2P53672 197 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 P2RY6Q15077 328 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 COQ5Q5HYK3 327 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 TSPO2Q5TGU0 170 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 TMEM225Q6GV28 225 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 C6orf89Q6UWU4 347 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 PATL1Q86TB9 770 aaKnown RBP12.97□□□□□ -0.33
ATG4B-224ENST00000494132 RANBP3LQ86VV4 465 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-224ENST00000494132 CALHM3Q86XJ0 350 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 TREML1Q86YW5 311 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 ZNF433Q8N7K0 673 aaPredicted RBP12.97□□□□□ -0.33
ATG4B-224ENST00000494132 ZIC4Q8N9L1 334 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 OR8J3Q8NGG0 315 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 OR6T1Q8NGN1 323 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 STK35Q8TDR2 534 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 TAAR8Q969N4 342 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 MCHR1Q99705 422 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 ARHGDIGQ99819 225 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 HDHD5Q9BXW7 423 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 TMEM27Q9HBJ8 222 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 SLC9A8Q9Y2E8 581 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 USF3Q68DE3 2245 aa12.97□□□□□ -0.33
ATG4B-224ENST00000494132 LRRN3E7EW58 273 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 AIM2O14862 343 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 ITGA5P08648 1049 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 COX4I1P13073 169 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 CD53P19397 219 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 COX5AP20674 150 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 GTF2E2P29084 291 aaKnown RBP12.96□□□□□ -0.33
ATG4B-224ENST00000494132 CDH12P55289 794 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 LGALS3BPQ08380 585 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 NRF1Q16656 503 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 ULK3Q6PHR2 472 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 SEZ6L2Q6UXD5 910 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 ZNF704Q6ZNC4 412 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-224ENST00000494132 AAED1Q7RTV5 226 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 SPATA21Q7Z572 469 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 TSPYL5Q86VY4 417 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-224ENST00000494132 PCYOX1LQ8NBM8 494 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 BHLHE22Q8NFJ8 381 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-224ENST00000494132 OR52N5Q8NH56 324 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 MFSD8Q8NHS3 518 aa12.96□□□□□ -0.33
ATG4B-224ENST00000494132 DNAJA4Q8WW22 397 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-224ENST00000494132 SLC47A1Q96FL8 570 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms