RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 RNF212BA8MTL3 300 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ITGB2P05107 769 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 DUSP7Q16829 419 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ACTBL2Q562R1 376 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 MANEAQ5SRI9 462 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 IL20RBQ6UXL0 311 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 IL17RDQ8NFM7 739 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SLC41A2Q96JW4 573 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ZBP1Q9H171 429 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 NXF5Q9H1B4 397 aaKnown RBP17.79■□□□□ 0.44
COL27A1-207ENST00000494090 C1GALT1Q9NS00 363 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 MYOTQ9UBF9 498 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SIGLEC6O43699 453 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 DBHP09172 617 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 RRAS2P62070 204 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-207ENST00000494090 CXADRP78310 365 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 UPRTQ96BW1 309 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 RSPRY1Q96DX4 576 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 R3HDMLQ9H3Y0 253 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ELOVL3Q9HB03 270 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SPHK1Q9NYA1 384 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 TIMM8BQ9Y5J9 83 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-207ENST00000494090 A0A1B0GUL6 1792 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 A8MXE2 369 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 YY2O15391 372 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SLC16A14Q7RTX9 510 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ADIPOR2Q86V24 386 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 LAX1Q8IWV1 398 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF454Q8N9F8 522 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SLC25A31Q9H0C2 315 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 METTL9Q9H1A3 318 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 OBP2BQ9NPH6 170 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 GLTPQ9NZD2 209 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 EMC9Q9Y3B6 208 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 OR2T7P0C7T2 308 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 BDKRB2P30411 391 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 EVI2BP34910 448 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 MTNR1BP49286 362 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 IL13RA1P78552 427 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 ACVR1Q04771 509 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 KCNJ8Q15842 424 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 TMEM52BQ4KMG9 183 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 DLEU7Q6UYE1 221 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 GAREM2Q75VX8 874 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SLC43A2Q8N370 569 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 PRR18Q8N4B5 295 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 OR2T27Q8NH04 317 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 OR56B4Q8NH76 319 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 OLIG1Q8TAK6 271 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 SLC22A12Q96S37 553 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 THAP10Q9P2Z0 257 aaPredicted RBP17.79■□□□□ 0.44
COL27A1-207ENST00000494090 RCE1Q9Y256 329 aa17.79■□□□□ 0.44
COL27A1-207ENST00000494090 TRPM3Q9HCF6 1732 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-207ENST00000494090 MTHFD2P13995 350 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 PRKAR1BP31321 381 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 MLF2Q15773 248 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-207ENST00000494090 KRBOX4Q5JUW0 171 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 FCRLAQ7L513 359 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 OR6F1Q8NGZ6 308 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 SLAMF7Q9NQ25 335 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 HS3ST3A1Q9Y663 406 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 TPT1P13693 172 aaKnown RBP17.78■□□□□ 0.44
COL27A1-207ENST00000494090 GABRR1P24046 479 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 TAS2R46P59540 309 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 SEC61A1P61619 476 aaKnown RBP17.78■□□□□ 0.44
COL27A1-207ENST00000494090 HENMT1Q5T8I9 393 aaKnown RBP17.78■□□□□ 0.44
COL27A1-207ENST00000494090 STEAP3Q658P3 488 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 MOB3CQ70IA8 216 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 TMEFF1Q8IYR6 380 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 OR7G2Q8NG99 324 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 VSX1Q9NZR4 365 aaPredicted RBP17.78■□□□□ 0.44
COL27A1-207ENST00000494090 NDUFAF4Q9P032 175 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 SHOXO15266 292 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 VASNQ6EMK4 673 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 FAM71E1Q6IPT2 247 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 APOOLQ6UXV4 268 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 SLC46A1Q96NT5 459 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 PFDN5Q99471 154 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 NIPSNAP1Q9BPW8 284 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 ANKRD19PQ9H560 264 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 LHX6Q9UPM6 363 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 NME7Q9Y5B8 376 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 WDPCPO95876 746 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 PIGAP37287 484 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 OR1D4P47884 311 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 ZP2Q05996 745 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 SQSTM1Q13501 440 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 TANGO2Q6ICL3 276 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 ZNF566Q969W8 418 aa17.78■□□□□ 0.44
COL27A1-207ENST00000494090 SERINC4A6NH21 518 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 HIDE1A8MVS5 230 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 CSO75390 466 aaKnown RBP17.77■□□□□ 0.44
COL27A1-207ENST00000494090 ABLIM3O94929 683 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 CR2P20023 1033 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 RAP2BP61225 183 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 C17orf67Q0P5P2 114 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 SLC22A6Q4U2R8 563 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 COMTD1Q86VU5 262 aa17.77■□□□□ 0.44
COL27A1-207ENST00000494090 AMBRA1Q9C0C7 1298 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms