RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 DUX4L3P0CJ86 424 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 DUX4L4P0CJ87 422 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 DUX4L5P0CJ88 424 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 DUX4L6P0CJ89 424 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 DUX4L7P0CJ90 424 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 CD79BP40259 229 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 GRK6P43250 576 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 CCR9P51686 369 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 AP2S1P53680 142 aaPredicted RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 SRP54P61011 504 aaKnown RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 RAB14P61106 215 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 GALK2Q01415 458 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 STX4Q12846 297 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 SNTB2Q13425 540 aaKnown RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 C2orf27AQ580R0 203 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 SNAP47Q5SQN1 464 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 BCL2L15Q5TBC7 163 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 GPR139Q6DWJ6 353 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 KIAA1324Q6UXG2 1013 aaKnown RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 C9orf62Q8N4C0 152 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 OR6C4Q8NGE1 309 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 OR1E3Q8WZA6 343 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 S100A16Q96FQ6 103 aaKnown RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 TIMP4Q99727 224 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 YIPF2Q9BWQ6 316 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 SEMA6CQ9H3T2 930 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 MCCC2Q9HCC0 563 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 BRD7Q9NPI1 651 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 C20orf141Q9NUB4 165 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 DUX4Q9UBX2 424 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 ZMIZ1Q9ULJ6 1067 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 NPTNQ9Y639 398 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 NUP210LQ5VU65 1888 aa10.55□□□□□ -0.72
RFC4-214ENST00000494047 ZFHX2Q9C0A1 2572 aaPredicted RBP10.55□□□□□ -0.72
RFC4-214ENST00000494047 MEIKINA0A087WXM9 373 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 LINC00862A6NCI5 91 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 OR6C74A6NCV1 312 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 SNRPGP15A8MWD9 76 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 KHNYNO15037 678 aaKnown RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 P2RX6O15547 441 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 LATO43561 262 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 GFRA3O60609 400 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 CTSVO60911 334 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 KRT33AO76009 404 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 RGS11O94810 467 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 RASGRP1O95267 797 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 HOXB3P14651 431 aaPredicted RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 EDNRAP25101 427 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 SLC6A8P48029 635 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 RPS4XP62701 263 aaKnown RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 CRYZQ08257 329 aaKnown RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 MGAT2Q10469 447 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 FAM53BQ14153 422 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 TRMT12Q53H54 448 aaKnown RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 OLFML2AQ68BL7 652 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 WBP2NLQ6ICG8 309 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 C5orf46Q6UWT4 87 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 THSD4Q6ZMP0 1018 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 OLIG3Q7RTU3 272 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 JAZF1Q86VZ6 243 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 SDR16C5Q8N3Y7 309 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 SPICQ8N5J4 248 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 ZNF417Q8TAU3 575 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 GPBAR1Q8TDU6 330 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 SNAPC3Q92966 411 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 LCORQ96JN0 433 aaPredicted RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 GFM1Q96RP9 751 aaKnown RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 MACROD1Q9BQ69 325 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 SEMA4CQ9C0C4 833 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 CHRNA10Q9GZZ6 450 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 UCK1Q9HA47 277 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 ATP13A2Q9NQ11 1180 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 MEPEQ9NQ76 525 aaPredicted RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 SLC17A5Q9NRA2 495 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 FBXL3Q9UKT7 428 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 ELF5Q9UKW6 265 aaPredicted RBP10.54□□□□□ -0.72
RFC4-214ENST00000494047 NUP50Q9UKX7 468 aa10.54□□□□□ -0.72
RFC4-214ENST00000494047 NPIPB9F8W1W9 429 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 K7EQS6 105 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 PEX12O00623 359 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 SLC31A1O15431 190 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 CTNSO60931 367 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 OR7A10O76100 309 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 TXNDC12O95881 172 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 CBX7O95931 251 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 IL5P05113 134 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 GKN3PP0CG01 181 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 SULT1A3P0DMM9 295 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 SULT1A4P0DMN0 295 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 TDGF1P13385 188 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 POLR2CP19387 275 aaPredicted RBP10.53□□□□□ -0.72
RFC4-214ENST00000494047 MAT2AP31153 395 aaKnown RBP10.53□□□□□ -0.72
RFC4-214ENST00000494047 RPL4P36578 427 aaKnown RBP10.53□□□□□ -0.72
RFC4-214ENST00000494047 ACAA2P42765 397 aaKnown RBP10.53□□□□□ -0.72
RFC4-214ENST00000494047 OR3A3P47888 321 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 MECP2P51608 486 aaKnown RBP10.53□□□□□ -0.72
RFC4-214ENST00000494047 CCR5P51681 352 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 PER3P56645 1201 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 HSD17B7P56937 341 aa10.53□□□□□ -0.72
RFC4-214ENST00000494047 OR12D2P58182 307 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms