RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 IGHA1P01876 353 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 NGFRP08138 427 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 OR3A3P47888 321 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SNRPD2P62316 118 aaKnown RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 FOXK2Q01167 660 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 BIKQ13323 160 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 NDUFAF6Q330K2 333 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 LCN1P1Q5VSP4 162 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SLC35F3Q8IY50 421 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 GDPD1Q8N9F7 314 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SMAP2Q8WU79 429 aaPredicted RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 SENP5Q96HI0 755 aaPredicted RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 ZNF649Q9BS31 505 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 PNO1Q9NRX1 252 aaKnown RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 TNFRSF10DQ9UBN6 386 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 EML5Q05BV3 1969 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 ASXL3Q9C0F0 2248 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SERINC4A6NH21 518 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 FAM25AB3EWG3 89 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 FAM25CB3EWG5 89 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 FAM25GB3EWG6 89 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 GABRPO00591 440 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 NDUFA2O43678 99 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 CSTAP01040 98 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 MAP2K3P46734 347 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SLC16A1P53985 500 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.63□□□□□ -0.39
VCP-207ENST00000493886 ULK3Q6PHR2 472 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 KIRREL2Q6UWL6 708 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 NOXA1Q86UR1 476 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 PLXDC1Q8IUK5 500 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SLC25A45Q8N413 288 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 SIRT6Q8N6T7 355 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 AP3S1Q92572 193 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 TTTY10Q9BZA0 68 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 CMC2Q9NRP2 79 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 DHCR7Q9UBM7 475 aaKnown RBP12.63□□□□□ -0.39
VCP-207ENST00000493886 RPS6KB2Q9UBS0 482 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 MMACHCQ9Y4U1 282 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 CACNG2Q9Y698 323 aa12.63□□□□□ -0.39
VCP-207ENST00000493886 A0A1B0GVT2 93 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 K7ESF4 209 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 DUX1O43812 170 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 PRKNO60260 465 aaPredicted RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 CXCL12P48061 93 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 INPP1P49441 399 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 GPLD1P80108 840 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 CSTF1Q05048 431 aaKnown RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 FAM27D1Q5T7N8 215 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 PRAMEF17Q5VTA0 474 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 ZNF57Q68EA5 555 aaPredicted RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 FCRLBQ6BAA4 426 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 LINC00114Q6XXX2 140 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 MEPCEQ7L2J0 689 aaKnown RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 OAFQ86UD1 273 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 RDH10Q8IZV5 341 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 KLHL36Q8N4N3 616 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 FAM181AQ8N9Y4 354 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 ZSCAN1Q8NBB4 408 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 PTPMT1Q8WUK0 201 aaPredicted RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 HCAR1Q9BXC0 346 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 ALG5Q9Y673 324 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 SEC16AO15027 2179 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 FAM240BA0A1B0GVZ2 78 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 EFCAB7A8K855 629 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 PAICSP22234 425 aaKnown RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 CRYZQ08257 329 aaKnown RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 PRPF38BQ5VTL8 546 aaKnown RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 CCDC36Q8IYA8 594 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 CARFQ8N187 725 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 FAM109AQ8N4B1 249 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 YIPF7Q8N8F6 280 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 ZNF321PQ8N8H1 164 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 OR1L3Q8NH93 324 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 UPRTQ96BW1 309 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 MVB12AQ96EY5 273 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 RNF170Q96K19 258 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 OR1F2PQ96R84 312 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 TNFRSF13CQ96RJ3 184 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 LMF1Q96S06 567 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 JAM3Q9BX67 310 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 DUSP15Q9H1R2 295 aaPredicted RBP12.62□□□□□ -0.39
VCP-207ENST00000493886 UNC13CQ8NB66 2214 aa12.62□□□□□ -0.39
VCP-207ENST00000493886 J3QRE1 110 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 GNB5O14775 395 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 DCNP07585 359 aaKnown RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 MYF5P13349 255 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 HOXB1P14653 301 aaPredicted RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 GLB1P16278 677 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 CSF2RBP32927 897 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 RELQ04864 619 aaPredicted RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 DMWDQ09019 674 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
VCP-207ENST00000493886 OR52N1Q8NH53 320 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 TSLPQ969D9 159 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 ATF6BQ99941 703 aa12.61□□□□□ -0.39
VCP-207ENST00000493886 CLEC4AQ9UMR7 237 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms