RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 CCDC14Q49A88 953 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 KLF17Q5JT82 389 aaPredicted RBP2.74□□□□□ -1.97
CLK1-213ENST00000492793 ECHDC2Q86YB7 292 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 C20orf203Q8NBC4 194 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 OR52H1Q8NGJ2 320 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 OR5D13Q8NGL4 314 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 OR9G1Q8NH87 305 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 FBXO30Q8TB52 745 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 UBE2E3Q969T4 207 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 KCNA7Q96RP8 456 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 CRACR2AQ9BSW2 395 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 GON7Q9BXV9 100 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 ROGDIQ9GZN7 287 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 RNF167Q9H6Y7 350 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 LRRC40Q9H9A6 602 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 KCNIP1Q9NZI2 227 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 NYAP2Q9P242 653 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 MTRF1LQ9UGC7 380 aaKnown RBP2.74□□□□□ -1.97
CLK1-213ENST00000492793 PNPLA6Q8IY17 1366 aa2.74□□□□□ -1.97
CLK1-213ENST00000492793 IGKV1D-8A0A087WSZ0 117 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 A0A1B0GVL5 298 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 CLRN2A0PK11 232 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 RIPK2O43353 540 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 PRDX3P30048 256 aaKnown RBP2.73□□□□□ -1.97
CLK1-213ENST00000492793 FMO3P31513 532 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 PTGDSP41222 190 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 QARSP47897 775 aaKnown RBP2.73□□□□□ -1.97
CLK1-213ENST00000492793 CCT3P49368 545 aaKnown RBP2.73□□□□□ -1.97
CLK1-213ENST00000492793 ZNF133P52736 654 aaPredicted RBP2.73□□□□□ -1.97
CLK1-213ENST00000492793 UBE2HP62256 183 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 ZMYND11Q15326 602 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 DUSP7Q16829 419 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 IMMTQ16891 758 aaKnown RBP2.73□□□□□ -1.97
CLK1-213ENST00000492793 SFT2D3Q587I9 215 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 CENPPQ6IPU0 288 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 EFL1Q7Z2Z2 1120 aaKnown RBP2.73□□□□□ -1.97
CLK1-213ENST00000492793 RDH10Q8IZV5 341 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 PNKDQ8N490 385 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 CCDC71LQ8N9Z2 235 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 OR51S1Q8NGJ8 323 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 NEIL3Q8TAT5 605 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 SCFD1Q8WVM8 642 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 RDH5Q92781 318 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 UFD1Q92890 307 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 ELSPBP1Q96BH3 223 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 C10orf35Q96D05 121 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 PSKH2Q96QS6 385 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 P2RY13Q9BPV8 354 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 SLC39A3Q9BRY0 314 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 YY1AP1Q9H869 796 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 ADAM28Q9UKQ2 775 aa2.73□□□□□ -1.97
CLK1-213ENST00000492793 ARHGAP21Q5T5U3 1957 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 RBMY1BA6NDE4 496 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 RBMY1EA6NEQ0 496 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 GJE1A6NN92 205 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 GFYI3L273 518 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 AGPAT2O15120 278 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 SPAG6O75602 509 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 TNFSF13O75888 250 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 IGHG4P01861 327 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 RBMY1DP0C7P1 496 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 RBMY1A1P0DJD3 496 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 SLC2A5P22732 501 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 IL12AP29459 219 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 GLP1RP43220 463 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 ARRB1P49407 418 aaPredicted RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 CEBPDP49716 269 aaPredicted RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 NUP107P57740 925 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 RPS14P62263 151 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 HMGN5P82970 282 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 CKAP4Q07065 602 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 KLRB1Q12918 225 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 ATP6AP1Q15904 470 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 NRF1Q16656 503 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 BOLA3Q53S33 107 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 C1orf100Q5SVJ3 147 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 OR2G6Q5TZ20 316 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 C11orf71Q6IPW1 123 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 KRTAP5-1Q6L8H4 278 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 UQCC3Q6UW78 93 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 IL34Q6ZMJ4 242 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 KRTAP11-1Q8IUC1 163 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 EIF1ADQ8N9N8 165 aaKnown RBP2.72□□□□□ -1.97
CLK1-213ENST00000492793 FNDC5Q8NAU1 212 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 BHLHE23Q8NDY6 225 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 OR6C4Q8NGE1 309 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 ARPC1AQ92747 370 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 MBOAT4Q96T53 435 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 RASL11BQ9BPW5 248 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 ANAPC11Q9NYG5 84 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 NEU3Q9UQ49 428 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 KCNIP3Q9Y2W7 256 aa2.72□□□□□ -1.97
CLK1-213ENST00000492793 BTBD17A6NE02 478 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 LOC110117498-PIK3R3F6TDL0 507 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 TIMM8AO60220 97 aaPredicted RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 ZNF861PO60384 105 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 RAMP3O60896 148 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 NPIPB7O75200 414 aa2.71□□□□□ -1.98
CLK1-213ENST00000492793 SURF6O75683 361 aaKnown RBP2.71□□□□□ -1.98
CLK1-213ENST00000492793 INSP01308 110 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms