RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 PTAFRP25105 342 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 CD40P25942 277 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 RNF220Q5VTB9 566 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 AGAP6Q5VW22 663 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 EPGNQ6UW88 154 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 SERPINA11Q86U17 422 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 GPAT4Q86UL3 456 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 DTX2Q86UW9 622 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 PRIMA1Q86XR5 153 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 ZIC4Q8N9L1 334 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 WDR31Q8NA23 367 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 OR9K2Q8NGE7 335 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 GTF2H4Q92759 462 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 MAL2Q969L2 176 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 RADILQ96JH8 1075 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 ZNF385AQ96PM9 386 aaKnown RBP15.15■□□□□ 0.02
SGMS1-204ENST00000492601 REG4Q9BYZ8 158 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 PAIP1Q9H074 479 aaKnown RBP15.15■□□□□ 0.02
SGMS1-204ENST00000492601 CACYBPQ9HB71 228 aaKnown RBP15.15■□□□□ 0.02
SGMS1-204ENST00000492601 DCTN4Q9UJW0 460 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 ZNF232Q9UNY5 417 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 MGAT4BQ9UQ53 548 aa15.15■□□□□ 0.02
SGMS1-204ENST00000492601 AQP7P3A6NL99 342 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 A8MVM7 634 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 CLIC1O00299 241 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 FRS3O43559 492 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 THBS1P07996 1170 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 CDH2P19022 906 aaPredicted RBP15.14■□□□□ 0.01
SGMS1-204ENST00000492601 SLC25A3Q00325 362 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 HOXC5Q00444 222 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 KRTAP1-1Q07627 177 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 RGNQ15493 299 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 B3GLCTQ6Y288 498 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 AAED1Q7RTV5 226 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 TMEM45BQ96B21 275 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 DHRS9Q9BPW9 319 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 SPATA9Q9BWV2 254 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 TAPBPLQ9BX59 468 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 SLC17A5Q9NRA2 495 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 THUMPD1Q9NXG2 353 aaKnown RBP15.14■□□□□ 0.01
SGMS1-204ENST00000492601 B3GALT5Q9Y2C3 310 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 ATRQ13535 2644 aa15.14■□□□□ 0.01
SGMS1-204ENST00000492601 SSX4O60224 188 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 TTKP33981 857 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 STX1BP61266 288 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 ZNF311Q5JNZ3 666 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 C1orf140Q5VVS0 124 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 TMEM225Q6GV28 225 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 DEPDC4Q8N2C3 294 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 C3orf49Q96BT1 292 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 CACNG6Q9BXT2 260 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 AMBRA1Q9C0C7 1298 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 RAD21L1Q9H4I0 556 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 ARMC7Q9H6L4 198 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 TCF7L2Q9NQB0 619 aa15.13■□□□□ 0.01
SGMS1-204ENST00000492601 COL6A5A8TX70 2615 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 KIAA1324LA8MWY0 1029 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-204ENST00000492601 POLR3GO15318 223 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-204ENST00000492601 MPGP29372 298 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 FABP6P51161 128 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 IRX1P78414 480 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-204ENST00000492601 TGFBR3Q03167 851 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 LGALS3BPQ08380 585 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 ZSWIM7Q19AV6 140 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 AGBL2Q5U5Z8 902 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 FBXL14Q8N1E6 418 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 MUC15Q8N387 334 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 GOLGA6L1Q8N7Z2 621 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 C1orf162Q8NEQ5 155 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-204ENST00000492601 HTRA1Q92743 480 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 EBF4Q9BQW3 602 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 SF3B5Q9BWJ5 86 aaKnown RBP15.12■□□□□ 0.01
SGMS1-204ENST00000492601 GRIP2Q9C0E4 1043 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 BARX1Q9HBU1 254 aaPredicted RBP15.12■□□□□ 0.01
SGMS1-204ENST00000492601 A4GALTQ9NPC4 353 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 SLCO1B3Q9NPD5 702 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 AMDHD2Q9Y303 409 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 IFT52Q9Y366 437 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 ATP23Q9Y6H3 246 aa15.12■□□□□ 0.01
SGMS1-204ENST00000492601 A0A096LPI6 279 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 TMEM229AB2RXF0 380 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 C5orf58C9J3I9 102 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 NR5A2O00482 541 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 KRT33AO76009 404 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 HOXB9P17482 250 aaPredicted RBP15.11■□□□□ 0.01
SGMS1-204ENST00000492601 P2RY4P51582 365 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 DMTNQ08495 405 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 FADDQ13158 208 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 HIKESHIQ53FT3 197 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 PRAMEF8Q5VWM4 474 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 PRAMEF7Q5VXH5 474 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 C11orf71Q6IPW1 123 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 DNM1P46Q6ZS02 220 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 FUNDC1Q8IVP5 155 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 C17orf78Q8N4C9 275 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 POMGNT2Q8NAT1 580 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 BBS10Q8TAM1 723 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 LRRC8CQ8TDW0 803 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 SLC25A36Q96CQ1 311 aa15.11■□□□□ 0.01
SGMS1-204ENST00000492601 ADAD1Q96M93 576 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms