RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 THBDP07204 575 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 RAP2AP10114 183 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 POU2F1P14859 743 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ATP5F1P24539 256 aaPredicted RBP11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SRD5A2P31213 254 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SLC15A1P46059 708 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 CLK1P49759 484 aaKnown RBP11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SLC12A2P55011 1212 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 B3GALT5-AS1P59052 145 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 HMGCS1Q01581 520 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SCRN3Q0VDG4 424 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 TBRG1Q3YBR2 411 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 FAM98BQ52LJ0 330 aaKnown RBP11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ARMCX4Q5H9R4 360 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 OR2A2Q6IF42 318 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 CYP20A1Q6UW02 462 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ISCA2Q86U28 154 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SLC22A9Q8IVM8 553 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 CADM2Q8N3J6 435 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 CNEP1R1Q8N9A8 125 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 MAPK1IP1LQ8NDC0 245 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SLC7A6Q92536 515 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 EXT2Q93063 718 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ZC3HAV1LQ96H79 300 aaKnown RBP11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ATOH8Q96SQ7 321 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ITPAQ9BY32 194 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 DCSTAMPQ9H295 470 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 SERHL2Q9H4I8 314 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 IFT22Q9H7X7 185 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 PRM3Q9NNZ6 103 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 FAM118AQ9NWS6 357 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 GLTPQ9NZD2 209 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 EHD3Q9NZN3 535 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 KLRF1Q9NZS2 232 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 OPTCQ9UBM4 332 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 ZDHHC2Q9UIJ5 367 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 MRPS18CQ9Y3D5 142 aaKnown RBP11.79□□□□□ -0.52
HDAC3-213ENST00000492506 PMF1-BGLAPU3KQ54 211 aa11.79□□□□□ -0.52
HDAC3-213ENST00000492506 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 A0A087X1B8 175 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 PRAMEF25A6NGN4 478 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 SLC22A20A6NK97 555 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 H0YIV9 168 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 NME4O00746 187 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 SULT1B1O43704 296 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 PLAUP00749 431 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 C2P06681 752 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 CD8BP10966 210 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 MTHFD2P13995 350 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 CPMP14384 443 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 NT5EP21589 574 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 YAP1P46937 504 aaKnown RBP11.78□□□□□ -0.52
HDAC3-213ENST00000492506 XKP51811 444 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 CDH13P55290 713 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 PRICKLE4Q2TBC4 344 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 TIMM50Q3ZCQ8 353 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 GPAT3Q53EU6 434 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 ZNF691Q5VV52 312 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 PODNL1Q6PEZ8 512 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 ZBTB46Q86UZ6 589 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 ZNF610Q8N9Z0 462 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 FNDC5Q8NAU1 212 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 OR4K14Q8NGD5 310 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 NDNFQ8TB73 568 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 TMEM171Q8WVE6 324 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 GIMAP5Q96F15 307 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 TSPAN17Q96FV3 270 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 LCORQ96JN0 433 aaPredicted RBP11.78□□□□□ -0.52
HDAC3-213ENST00000492506 SFXN2Q96NB2 322 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 GPR22Q99680 433 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 PPA2Q9H2U2 334 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 DUSP21Q9H596 190 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 ALG9Q9H6U8 611 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 SCPEP1Q9HB40 452 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 C3orf14Q9HBI5 128 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 TIGARQ9NQ88 270 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 POLE4Q9NR33 117 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 NUDT4Q9NZJ9 180 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 DNAJB9Q9UBS3 223 aa11.78□□□□□ -0.52
HDAC3-213ENST00000492506 A0A075B6Q4 140 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.77□□□□□ -0.53
HDAC3-213ENST00000492506 FRG2CA6NGY1 282 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 RNF223E7ERA6 249 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 TRIM77I1YAP6 450 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 EMC8O43402 210 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 INMTO95050 263 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 C1QBP02746 253 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 CHRNGP07510 517 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 EPB42P16452 691 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 ATP5J2P56134 94 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 CHRNB3Q05901 458 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 PLCXD2Q0VAA5 305 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 MAP4K2Q12851 820 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 FAPQ12884 760 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 EXOSC7Q15024 291 aaKnown RBP11.77□□□□□ -0.53
HDAC3-213ENST00000492506 GUSBP1Q15486 140 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 TAB1Q15750 504 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 TOR2AQ5JU69 321 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 LIPJQ5W064 366 aa11.77□□□□□ -0.53
HDAC3-213ENST00000492506 ANKRD34AQ69YU3 496 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms