RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 KCNN2Q9H2S1 579 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 C12orf49Q9H741 205 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 CALHM2Q9HA72 323 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ZMAT5Q9UDW3 170 aaKnown RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 DTX4Q9Y2E6 619 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 KLF13Q9Y2Y9 288 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 MAGED1Q9Y5V3 778 aaPredicted RBP4.11□□□□□ -1.75
TRA2B-215ENST00000492417 DENND4CQ5VZ89 1909 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 ADAMTS9Q9P2N4 1935 aa4.11□□□□□ -1.75
TRA2B-215ENST00000492417 TRAV17A0A0B4J275 112 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 LOC100130705A0A1B0GUX0 176 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 A0A1W2PPL8 197 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SH3D21A4FU49 640 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TRAPPC13A5PLN9 417 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OR2AT4A6NND4 320 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 NTN3O00634 580 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PPM1BO75688 479 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CBX7O95931 251 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 APOC1P02654 83 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 C1QCP02747 245 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 F13BP05160 661 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CHRM4P08173 479 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PRR35P0CG20 571 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF823P16415 610 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DNASE1P24855 282 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PCGF2P35227 344 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 NUDT6P53370 316 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SOX8P57073 446 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TSPAN5P62079 268 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SNRPD2P62316 118 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZFP36L1Q07352 338 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF181Q2M3W8 571 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PRICKLE4Q2TBC4 344 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ADPRMQ3LIE5 342 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 IDNKQ5T6J7 187 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RAB12Q6IQ22 244 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DLEU7Q6UYE1 221 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CYB561A3Q8NBI2 242 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PSD4Q8NDX1 1056 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PROKR2Q8NFJ6 384 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OR6T1Q8NGN1 323 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PTPMT1Q8WUK0 201 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FKBP10Q96AY3 582 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TM4SF19Q96DZ7 209 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DHRS1Q96LJ7 313 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 KCTD7Q96MP8 289 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RASL10BQ96S79 203 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SPSB2Q99619 263 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 BARD1Q99728 777 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DPCDQ9BVM2 203 aaPredicted RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RBM24Q9BX46 236 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DPAGT1Q9H3H5 408 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SYNPO2LQ9H987 977 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 C14orf119Q9NWQ9 140 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 KLHL13Q9P2N7 655 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 GRHPRQ9UBQ7 328 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 UBQLN2Q9UHD9 624 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 POU2F3Q9UKI9 436 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 MCTS1Q9ULC4 181 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RNF6Q9Y252 685 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SLC35A3Q9Y2D2 325 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ABCA4P78363 2273 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF318Q5VUA4 2279 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 KANTRA0A1W2PQU2 76 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 DLGAP1O14490 977 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RASAL1O95294 804 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FUT1P19526 365 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ENDOUP21128 410 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FPR1P21462 350 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 LCN1P31025 176 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 UQCRC1P31930 480 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 EVI2BP34910 448 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SLC6A9P48067 706 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 HLCSP50747 726 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CTXN1P60606 82 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SNRPNP63162 240 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 EIF5AP63241 154 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 CDC20Q12834 499 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 LY6DQ14210 128 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ODF4Q2M2E3 257 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SLC36A3Q495N2 470 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PIGGQ5H8A4 983 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 C6orf141Q5SZD1 244 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 MRM1Q6IN84 353 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 BORAQ6PGQ7 559 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TBPL2Q6SJ96 375 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 SSX6Q7RTT6 188 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PLPP5Q8NEB5 264 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 OR4K13Q8NH42 304 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 COQ8AQ8NI60 647 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PRR7Q8TB68 274 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 THAP4Q8WY91 577 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 TMEM203Q969S6 136 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZC3HAV1LQ96H79 300 aaKnown RBP4.1□□□□□ -1.75
TRA2B-215ENST00000492417 RBP7Q96R05 134 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 PIP5K1AQ99755 562 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 ZNF559Q9BR84 538 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 AIFM2Q9BRQ8 373 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 FUZQ9BT04 418 aa4.1□□□□□ -1.75
TRA2B-215ENST00000492417 HES7Q9BYE0 225 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms