RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CTRCQ99895 268 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 TMEM43Q9BTV4 400 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 TSPAN10Q9H1Z9 355 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-220ENST00000492280 TRAV6A0A075B6T7 132 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 NSA2O95478 260 aaKnown RBP11.38□□□□□ -0.59
HMGN1-220ENST00000492280 PLGP00747 810 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-220ENST00000492280 CD38P28907 300 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 GABRA4P48169 554 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.38□□□□□ -0.59
HMGN1-220ENST00000492280 CNN2Q99439 309 aaKnown RBP11.38□□□□□ -0.59
HMGN1-220ENST00000492280 SOSTQ9BQB4 213 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 MRPL15Q9P015 296 aaKnown RBP11.38□□□□□ -0.59
HMGN1-220ENST00000492280 KLHDC2Q9Y2U9 406 aa11.38□□□□□ -0.59
HMGN1-220ENST00000492280 A0A087WUJ7 227 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 IGHV3-20A0A0C4DH32 117 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 PLPP2O43688 288 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 PTHLHP12272 177 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 SPI1P17947 270 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 EDNRAP25101 427 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 DDOSTP39656 456 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 CDKN2AP42771 156 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 RPL6Q02878 288 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF141Q15928 474 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 MANEAQ5SRI9 462 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 STPG1Q5TH74 334 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 PRSS45Q7RTY3 260 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 LSMEM1Q8N8F7 131 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 PTPMT1Q8WUK0 201 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 THAP4Q8WY91 577 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 HOXB13Q92826 284 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 KTI12Q96EK9 354 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 SRA1Q9HD15 236 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 TRPV5Q9NQA5 729 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 SDK2Q58EX2 2172 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ELOA3DA6NLF2 546 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 C10orf142B7Z368 130 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ICOSLGO75144 302 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 IFNGP01579 166 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 SYPP08247 313 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 MTNR1BP49286 362 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 NANOS3P60323 173 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 LTBQ06643 244 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ELOA3BQ3SY89 546 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 Q5BKY6 102 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 DMKNQ6E0U4 476 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 RPL13AP3Q6NVV1 102 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 LINC00114Q6XXX2 140 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 GRAMD2AQ8IUY3 354 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 SERPINA12Q8IW75 414 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF595Q8IYB9 648 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 SCAIQ8N9R8 606 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 NPEPL1Q8NDH3 523 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ELOA3Q8NG57 546 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 TCTN2Q96GX1 697 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 BEX1Q9HBH7 125 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 TRBV2A0A0J9YWF9 115 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 C11orf98E9PRG8 122 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 NUDT14O95848 222 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 OR8G3PP0DMU2 310 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 NME1P15531 152 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 RPS5P46782 204 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 DGCR2P98153 550 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 EGR4Q05215 589 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 FUT7Q11130 342 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ELOCQ15369 112 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 HES5Q5TA89 166 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 OR5M10Q6IEU7 315 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 MZT2AQ6P582 158 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF550Q7Z398 422 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF433Q8N7K0 673 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 LSM14AQ8ND56 463 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 JAM3Q9BX67 310 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 TTYH1Q9H313 450 aaPredicted RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 AUNIPQ9H7T9 357 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 PDE7BQ9NP56 450 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 RBFOX1Q9NWB1 397 aaKnown RBP11.37□□□□□ -0.59
HMGN1-220ENST00000492280 MCUBQ9NWR8 336 aa11.37□□□□□ -0.59
HMGN1-220ENST00000492280 CEP192Q8TEP8 1941 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 TMEM72A0PK05 275 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 RAD1O60671 282 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 CPNE3O75131 537 aaKnown RBP11.36□□□□□ -0.59
HMGN1-220ENST00000492280 OR2B3O76000 313 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 SOX2P48431 317 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 SNRPD2P62316 118 aaKnown RBP11.36□□□□□ -0.59
HMGN1-220ENST00000492280 GPR176Q14439 515 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 CDK5R1Q15078 307 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 LANCL3Q6ZV70 420 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 TRILQ7L0X0 811 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 OR8K3Q8NH51 312 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 ZNF563Q8TA94 476 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 THAP3Q8WTV1 239 aaPredicted RBP11.36□□□□□ -0.59
HMGN1-220ENST00000492280 AHCYL2Q96HN2 611 aaKnown RBP11.36□□□□□ -0.59
HMGN1-220ENST00000492280 G6PC3Q9BUM1 346 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 BRD7Q9NPI1 651 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 PRDM9Q9NQV7 894 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 LANCL2Q9NS86 450 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 RNF215Q9Y6U7 377 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 C2orf72A6NCS6 295 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 OR6C70A6NIJ9 312 aa11.36□□□□□ -0.59
HMGN1-220ENST00000492280 SRPX2O60687 465 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms