RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 PARPBPQ9NWS1 579 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 MAGED1Q9Y5V3 778 aaPredicted RBP15.83■□□□□ 0.12
HMGN1-219ENST00000491183 GMEB1Q9Y692 573 aa15.83■□□□□ 0.12
HMGN1-219ENST00000491183 AQP7P3A6NL99 342 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 TMEM229AB2RXF0 380 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 SMAD7O15105 426 aaKnown RBP15.82■□□□□ 0.12
HMGN1-219ENST00000491183 CD8AP01732 235 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 HEXAP06865 529 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 ARAFP10398 606 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 AGKQ53H12 422 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 C9orf135Q5VTT2 229 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 C1orf140Q5VVS0 124 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 COMTD1Q86VU5 262 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 WDR31Q8NA23 367 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 OR9K2Q8NGE7 335 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 NFKBIDQ8NI38 313 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 DYDC1Q8WWB3 177 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 TMEM45BQ96B21 275 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 SF3B5Q9BWJ5 86 aaKnown RBP15.82■□□□□ 0.12
HMGN1-219ENST00000491183 AMBRA1Q9C0C7 1298 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 ARMC7Q9H6L4 198 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 INTS9Q9NV88 658 aaKnown RBP15.82■□□□□ 0.12
HMGN1-219ENST00000491183 ADPRHL2Q9NX46 363 aa15.82■□□□□ 0.12
HMGN1-219ENST00000491183 CISD1Q9NZ45 108 aaKnown RBP15.82■□□□□ 0.12
HMGN1-219ENST00000491183 A0A1W2PP18 115 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 ABCD4O14678 606 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 ETS2P15036 469 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 ATP4BP51164 291 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 ZNF83P51522 516 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 GCNT6Q5T4J0 391 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 TMEM225Q6GV28 225 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 STK35Q8TDR2 534 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 CKAP2Q8WWK9 683 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 SLC35B4Q969S0 331 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 TAPBPLQ9BX59 468 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 CACYBPQ9HB71 228 aaKnown RBP15.81■□□□□ 0.12
HMGN1-219ENST00000491183 TMEM45AQ9NWC5 275 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 UPB1Q9UBR1 384 aa15.81■□□□□ 0.12
HMGN1-219ENST00000491183 FAM171A2A8MVW0 826 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 HMGB1P1B2RPK0 211 aaPredicted RBP15.8■□□□□ 0.12
HMGN1-219ENST00000491183 C5orf58C9J3I9 102 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 FTCDNL1E5RQL4 147 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 TPST1O60507 370 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 GPX2P18283 190 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 PRKAR1BP31321 381 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 CDKN1AP38936 164 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 CDK6Q00534 326 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 EGR4Q05215 589 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 GLIPR1L2Q4G1C9 344 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 OR7E24Q6IFN5 339 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 DLEU7Q6UYE1 221 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 AAED1Q7RTV5 226 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 HDXQ7Z353 690 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 GPAT4Q86UL3 456 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 THOC1Q96FV9 657 aaKnown RBP15.8■□□□□ 0.12
HMGN1-219ENST00000491183 TRAF4Q9BUZ4 470 aaPredicted RBP15.8■□□□□ 0.12
HMGN1-219ENST00000491183 PTDSS2Q9BVG9 487 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 PRR14Q9BWN1 585 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 C1QTNF6Q9BXI9 259 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 PIF1Q9H611 641 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 DCTN4Q9UJW0 460 aa15.8■□□□□ 0.12
HMGN1-219ENST00000491183 E7EQL1 145 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 NDUFS7O75251 213 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 PTNP21246 168 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 PPIBP23284 216 aaKnown RBP15.79■□□□□ 0.12
HMGN1-219ENST00000491183 PTAFRP25105 342 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 CD40P25942 277 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 HTR2AP28223 471 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 SLC25A3Q00325 362 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 SPOCK1Q08629 439 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 TNK1Q13470 666 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 SQLEQ14534 574 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 ADRM1Q16186 407 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 REEP3Q6NUK4 255 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 TMEM108Q6UXF1 575 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 CREB3L2Q70SY1 520 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 DTX2Q86UW9 622 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 EPHX4Q8IUS5 362 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 MFSD8Q8NHS3 518 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 TRMT61AQ96FX7 289 aaKnown RBP15.79■□□□□ 0.12
HMGN1-219ENST00000491183 MAGEB18Q96M61 343 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 GRIP2Q9C0E4 1043 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 SLCO5A1Q9H2Y9 848 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 SLC17A5Q9NRA2 495 aa15.79■□□□□ 0.12
HMGN1-219ENST00000491183 HEATR1Q9H583 2144 aaKnown RBP15.79■□□□□ 0.12
HMGN1-219ENST00000491183 NAV3Q8IVL0 2385 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 M0R1B8 84 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 H2AFXP16104 143 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 MPGP29372 298 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 RPS5P46782 204 aaKnown RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 CDH11P55287 796 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 IRX1P78414 480 aaPredicted RBP15.78■□□□□ 0.12
HMGN1-219ENST00000491183 LGALS3BPQ08380 585 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 RUNDC3AQ59EK9 446 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 DHRS4L2Q6PKH6 230 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 KLHL17Q6TDP4 642 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 C6orf89Q6UWU4 347 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 KDM8Q8N371 416 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 C17orf78Q8N4C9 275 aa15.78■□□□□ 0.12
HMGN1-219ENST00000491183 LSMEM1Q8N8F7 131 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms