RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 SPRR3Q9UBC9 169 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 POFUT2Q9Y2G5 429 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 PKD1L2Q7Z442 2459 aa9.85□□□□□ -0.83
VARS2-210ENST00000490699 NCKAP5O14513 1909 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 MGAQ8IWI9 3026 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 IGKV1D-42A0A075B6H8 117 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 ZC3H12DA2A288 527 aaKnown RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 UNC119BA6NIH7 251 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 LIPT2A6NK58 231 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 AHRRA9YTQ3 701 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 AKAP8O43823 692 aaKnown RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 PIP5K1CO60331 668 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 VAMP5O95183 116 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 HPRP00739 348 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 PLGP00747 810 aaPredicted RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 OPN1LWP04000 364 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 FUT1P19526 365 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 IL11P20809 199 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 IGFBP5P24593 272 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 RPL4P36578 427 aaKnown RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 GPR4P46093 362 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 LIMS1P48059 325 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 IST1P53990 364 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 CLDN18P56856 261 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 CLDN20P56880 219 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 PRPS1P60891 318 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 TSPAN31Q12999 210 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 SEC23BQ15437 767 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 SNCBQ16143 134 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 ZNF74Q16587 644 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 ZNF324BQ6AW86 544 aaPredicted RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 TMEM225Q6GV28 225 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 HMBOX1Q6NT76 420 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 C1orf94Q6P1W5 598 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 ZNF585AQ6P3V2 769 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 PGBD2Q6P3X8 592 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 TBPL2Q6SJ96 375 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 TMPRSS11FQ6ZWK6 438 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 ATCAYQ86WG3 371 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 SLC43A2Q8N370 569 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 PACRGLQ8N7B6 248 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 OR9Q2Q8NGE9 314 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 OR5J2Q8NH18 312 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 OR10D3Q8NH80 312 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 TEX47Q8TBZ9 253 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 FANK1Q8TC84 345 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 OSTF1Q92882 214 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 TAAR8Q969N4 342 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 RELTQ969Z4 430 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 KTI12Q96EK9 354 aaPredicted RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 ARL5BQ96KC2 179 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 FEVQ99581 238 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 NPAS1Q99742 590 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 PRRG3Q9BZD7 231 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 PRDM14Q9GZV8 571 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 GABARAPL1Q9H0R8 117 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 TP63Q9H3D4 680 aaPredicted RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 NTN4Q9HB63 628 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 PAPOLBQ9NRJ5 636 aaKnown RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 VNN3Q9NY84 501 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 MRPL39Q9NYK5 338 aaKnown RBP9.84□□□□□ -0.83
VARS2-210ENST00000490699 B3GALT5Q9Y2C3 310 aa9.84□□□□□ -0.83
VARS2-210ENST00000490699 CACNA1GO43497 2377 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 A0A0J9YW62 118 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 SLC22A20A6NK97 555 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 BLOC1S5-TXNDC5H3BN57 136 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 H3BN98 237 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 CXCL13O43927 109 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 NPIPB7O75200 414 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 ADORA3P0DMS8 318 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 POU2F1P14859 743 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 CBLP22681 906 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 AHCYP23526 432 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 GRPRP30550 384 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 ALDH3A2P51648 485 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 MLLT10P55197 1068 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 HSF1Q00613 529 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 EGR4Q05215 589 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 C1DQ13901 141 aaKnown RBP9.83□□□□□ -0.84
VARS2-210ENST00000490699 DAG1Q14118 895 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 LRRC36Q1X8D7 754 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 PAQR6Q6TCH4 344 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 PCSK4Q6UW60 755 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 H1FNTQ75WM6 255 aaPredicted RBP9.83□□□□□ -0.84
VARS2-210ENST00000490699 PRICKLE2Q7Z3G6 844 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 HDDC2Q7Z4H3 204 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 GGNQ86UU5 652 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 CBR4Q8N4T8 237 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 ST6GALNAC3Q8NDV1 305 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 ADPRHL1Q8NDY3 354 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 OR5M9Q8NGP3 310 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 FAM57AQ8TBR7 257 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 ZPLD1Q8TCW7 415 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 MAGEE2Q8TD90 523 aaPredicted RBP9.83□□□□□ -0.84
VARS2-210ENST00000490699 ZNF524Q96C55 264 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 DNAJA3Q96EY1 480 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 WDYHV1Q96HA8 205 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 TRIB1Q96RU8 372 aa9.83□□□□□ -0.84
VARS2-210ENST00000490699 TACO1Q9BSH4 297 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms