RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ANAPC11Q9NYG5 84 aa3.45□□□□□ -1.86
HMGB1P38-201ENST00000490557 TMEM9Q9P0T7 183 aa3.45□□□□□ -1.86
HMGB1P38-201ENST00000490557 LCMT1Q9UIC8 334 aa3.45□□□□□ -1.86
HMGB1P38-201ENST00000490557 BRD4O60885 1362 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 ANKRD30BQ9BXX2 1392 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 SMIM28A0A1B0GU29 152 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 RNF222A6NCQ9 220 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 C9JVG2 144 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 POLR1CO15160 346 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 RRP8O43159 456 aaKnown RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 ZSCAN12O43309 604 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR1F1O43749 312 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 TGM6O95932 706 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 MBP02144 154 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 CHRNA1P02708 482 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 CYP2B6P20813 491 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 NTHL1P78549 312 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 VLDLRP98155 873 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 OC90Q02509 493 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 ZNF154Q13106 437 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 ELAVL3Q14576 367 aaKnown RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 STK38Q15208 465 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 ANGPT1Q15389 498 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 CDKN3Q16667 212 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 C2orf83Q53S99 150 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 HSP90AA4PQ58FG1 418 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 WSCD1Q658N2 575 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 ATL3Q6DD88 541 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 RNASEKQ6P5S7 137 aaKnown RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 TMEM184AQ6ZMB5 413 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 ERO1BQ86YB8 467 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR10H4Q8NGA5 316 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 LKAAEAR1Q8TD35 194 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 PAQR8Q8TEZ7 354 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 KCNS3Q9BQ31 491 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 CENPKQ9BS16 269 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 POLR3FQ9H1D9 316 aaPredicted RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 PIPOXQ9P0Z9 390 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 PISDQ9UG56 409 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 RPH3ALQ9UNE2 315 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 SAMD4AQ9UPU9 718 aaKnown RBP3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 WDR45Q9Y484 360 aa3.44□□□□□ -1.86
HMGB1P38-201ENST00000490557 CARMIL1Q5VZK9 1371 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TRAV25A0A0B4J276 109 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 A0A0J9YYE9 177 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 A0A1B0GVL5 298 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 SMCO3A2RU48 225 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 FAM74A7A6NL05 159 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 SNTNA6NMZ2 147 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 C12orf71A8MTZ7 269 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 STX7O15400 261 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TIMM8AO60220 97 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TPST2O60704 377 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 UPK3AO75631 287 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 CABYRO75952 493 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 NEBLO76041 1014 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 IGHV3-23P01764 117 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TRBC1P01850 177 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 FTH1P02794 183 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 OPN1LWP04000 364 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 STSP08842 583 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 MCF2P10911 925 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 CPN1P15169 458 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TNNI1P19237 187 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 SRMP19623 302 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 VDAC1P21796 283 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 ADORA2BP29275 332 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 CYLC1P35663 651 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 HTR2BP41595 481 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 MAGEA8P43361 318 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 RPS5P46782 204 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 RPL29P47914 159 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 CSNK1EP49674 416 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TPMTP51580 245 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 YWHAGP61981 247 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 RPL8P62917 257 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 RGS1Q08116 209 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 ASPHQ12797 758 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 XRCC4Q13426 336 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 MESDQ14696 234 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 FAM74A3Q4VXF1 159 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 KCNIP4Q6PIL6 250 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TMEM107Q6UX40 140 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 SCARA5Q6ZMJ2 495 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 STAC2Q6ZMT1 411 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 DPY19L4Q7Z388 723 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 LINC00523Q86TU6 105 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 MICU2Q8IYU8 434 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 TMEM123Q8N131 208 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 ASCC1Q8N9N2 400 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR2T33Q8NG76 320 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 OR4C5Q8NGB2 326 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 M1APQ8TC57 530 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 GPX8Q8TED1 209 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 GLYATL2Q8WU03 294 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 PDCD6IPQ8WUM4 868 aaKnown RBP3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 PIGCQ92535 297 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 FGGYQ96C11 551 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 NUS1Q96E22 293 aa3.43□□□□□ -1.86
HMGB1P38-201ENST00000490557 ZBED3Q96IU2 234 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms