RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 TMEM45AQ9NWC5 275 aa7.1□□□□□ -1.27
USP39-216ENST00000490193 SPEF1Q9Y4P9 236 aa7.1□□□□□ -1.27
USP39-216ENST00000490193 TMED7-TICAM2A0A0A6YYA0 188 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 A0A1W2PPM1 405 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 TMEM129A0AVI4 362 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 OR6C65A6NJZ3 312 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 hCG_2039718K7EN88 272 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 PIP5K1BO14986 540 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 AGR2O95994 175 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 IFNGR1P15260 489 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 NPR2P20594 1047 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 PRPS1L1P21108 318 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 CALCRP30988 508 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 CRHR1P34998 444 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 SLC1A3P43003 542 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 CCT5P48643 541 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 POLR2HP52434 150 aaKnown RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 HILS1P60008 231 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 RPS26P62854 115 aaKnown RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 ACTG1P63261 375 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 HGFACQ04756 655 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 LGALS3BPQ08380 585 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 FUT5Q11128 374 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 TRIP10Q15642 601 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 FAM153CQ494X1 144 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 PRR31Q5SQ13 230 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 OTUD3Q5T2D3 398 aaPredicted RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 TYW3Q6IPR3 259 aaKnown RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 FRRS1Q6ZNA5 592 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 RINLQ6ZS11 566 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 OLIG3Q7RTU3 272 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 AAED1Q7RTV5 226 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 C16orf62Q7Z3J2 963 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 C6orf120Q7Z4R8 191 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 GLCCI1Q86VQ1 547 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 DDIASQ8IXT1 998 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 ARFGAP2Q8N6H7 521 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 NOA1Q8NC60 698 aaKnown RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 OR9K2Q8NGE7 335 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 UBASH3BQ8TF42 649 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 ZNF418Q8TF45 676 aaPredicted RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 BCL2L2Q92843 193 aaPredicted RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 DNAJA3Q96EY1 480 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 SLC35G5Q96KT7 338 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 ANKRD27Q96NW4 1050 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 ZNF385AQ96PM9 386 aaKnown RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 DUSP26Q9BV47 211 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 GATA5Q9BWX5 397 aaPredicted RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 NELFAQ9H3P2 528 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 METTL17Q9H7H0 456 aaPredicted RBP7.09□□□□□ -1.27
USP39-216ENST00000490193 MID2Q9UJV3 735 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 OSGIN1Q9UJX0 560 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 PRDM4Q9UKN5 801 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 TMED7Q9Y3B3 224 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 FIS1Q9Y3D6 152 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 WDR45Q9Y484 360 aa7.09□□□□□ -1.27
USP39-216ENST00000490193 RNF103-CHMP3A0A140T963 221 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 TMEM72A0PK05 275 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 ZC3H12DA2A288 527 aaKnown RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 LIPT2A6NK58 231 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 AQP7P3A6NL99 342 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 VSTM5A8MXK1 200 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 TMEM233B4DJY2 109 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 ZNF587BE7ETH6 402 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 CFLARO15519 480 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 PEX11AO75192 247 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 LGI1O95970 557 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 GPIP06744 558 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 CDH2P19022 906 aaPredicted RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 RYKP34925 604 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 THBS4P35443 961 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 SOAT1P35610 550 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 LIMS1P48059 325 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 IDH2P48735 452 aaKnown RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 P2RY4P51582 365 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 SH3BGRP55822 239 aaPredicted RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 UBE2NP61088 152 aaKnown RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 KCNJ10P78508 379 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 PCLAFQ15004 111 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 ADRM1Q16186 407 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 WHAMMP3Q1A5X7 153 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 ATP6AP1LQ52LC2 224 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 C6orf136Q5SQH8 315 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 VHLLQ6RSH7 139 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 C10orf107Q8IVU9 208 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 CMIPQ8IY22 773 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 ZCCHC24Q8N2G6 241 aaKnown RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 Q8N3U1 123 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 SVOPLQ8N434 492 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 KRTCAP2Q8N6L1 136 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 TMEM99Q8N816 258 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 TMEM186Q96B77 213 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 ROPN1LQ96C74 230 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 AURKBQ96GD4 344 aaPredicted RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 RBM4Q9BWF3 364 aaKnown RBP7.08□□□□□ -1.28
USP39-216ENST00000490193 LINC00470Q9BZP3 86 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 RACGAP1Q9H0H5 632 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 OR51I1Q9H343 314 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 SEC61A2Q9H9S3 476 aa7.08□□□□□ -1.28
USP39-216ENST00000490193 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms