RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 UQCRBP14927 111 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 IL7RP16871 459 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 RPS4Y1P22090 263 aaKnown RBP13.82□□□□□ -0.2
PLOD3-216ENST00000489927 S100A3P33764 101 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 CLNS1AP54105 237 aaKnown RBP13.82□□□□□ -0.2
PLOD3-216ENST00000489927 ABCE1P61221 599 aaKnown RBP13.82□□□□□ -0.2
PLOD3-216ENST00000489927 LGALS3BPQ08380 585 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 GNA13Q14344 377 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 CHI3L2Q15782 390 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 TBRG1Q3YBR2 411 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 LRRC74BQ6ZQY2 392 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 SLC46A3Q7Z3Q1 461 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 SPATA19Q7Z5L4 167 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 TEX37Q96LM6 180 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 SLC38A2Q96QD8 506 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 ROPN1BQ9BZX4 212 aaPredicted RBP13.82□□□□□ -0.2
PLOD3-216ENST00000489927 MTHFD2LQ9H903 347 aaPredicted RBP13.82□□□□□ -0.2
PLOD3-216ENST00000489927 ROPN1Q9HAT0 212 aaPredicted RBP13.82□□□□□ -0.2
PLOD3-216ENST00000489927 OBP2BQ9NPH6 170 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 RLIMQ9NVW2 624 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 TMEM45AQ9NWC5 275 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 BTNL2Q9UIR0 455 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 RAP2CQ9Y3L5 183 aa13.82□□□□□ -0.2
PLOD3-216ENST00000489927 HEATR1Q9H583 2144 aaKnown RBP13.81□□□□□ -0.2
PLOD3-216ENST00000489927 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 CCDC154A6NI56 674 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 KRT33AO76009 404 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 LGI1O95970 557 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 SERPINE1P05121 402 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 DBIP07108 87 aaKnown RBP13.81□□□□□ -0.2
PLOD3-216ENST00000489927 GKN3PP0CG01 181 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 CXCR1P25024 350 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 CDKN2CP42773 168 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 SELENOPP49908 381 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 RPL14P50914 215 aaKnown RBP13.81□□□□□ -0.2
PLOD3-216ENST00000489927 NME5P56597 212 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 BNIP2Q12982 314 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 ADIPOQQ15848 244 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 IQCCQ4KMZ1 466 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 COX20Q5RI15 118 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 TMEM225Q6GV28 225 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 ABHD12BQ7Z5M8 362 aaPredicted RBP13.81□□□□□ -0.2
PLOD3-216ENST00000489927 OR1K1Q8NGR3 316 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 PNPT1Q8TCS8 783 aaKnown RBP13.81□□□□□ -0.2
PLOD3-216ENST00000489927 ALKBH3Q96Q83 286 aaPredicted RBP13.81□□□□□ -0.2
PLOD3-216ENST00000489927 PANX1Q96RD7 426 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 KCNS3Q9BQ31 491 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 SOX7Q9BT81 388 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 KATNB1Q9BVA0 655 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 NUF2Q9BZD4 464 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 BPESC1Q9GZL8 116 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 PIF1Q9H611 641 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 MYOZ1Q9NP98 299 aaPredicted RBP13.81□□□□□ -0.2
PLOD3-216ENST00000489927 ADPRHL2Q9NX46 363 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 ARFGEF3Q5TH69 2177 aa13.81□□□□□ -0.2
PLOD3-216ENST00000489927 CDHR4A6H8M9 788 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 B9A039 149 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 ZNF587BE7ETH6 402 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 HAX1O00165 279 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 NR5A2O00482 541 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 TGFAP01135 160 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 CRYAAP02489 173 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 GSNP06396 782 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 OR4A8P0C604 315 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 NR2F1P10589 423 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 ZNF23P17027 643 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 LBPP18428 481 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 HNF1AP20823 631 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 P2RY4P51582 365 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 UBE2NP61088 152 aaKnown RBP13.8□□□□□ -0.2
PLOD3-216ENST00000489927 UFM1P61960 85 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 TUBA1BP68363 451 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 TUBA4AP68366 448 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 MAPK11Q15759 364 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 GSTA3Q16772 222 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 ANKRD16Q6P6B7 361 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 VHLLQ6RSH7 139 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 CREB3L2Q70SY1 520 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 TUBA1AQ71U36 451 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 LINGO2Q7L985 606 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 TRIML2Q8N7C3 387 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 BCL2L2Q92843 193 aaPredicted RBP13.8□□□□□ -0.2
PLOD3-216ENST00000489927 SORT1Q99523 831 aa13.8□□□□□ -0.2
PLOD3-216ENST00000489927 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.8□□□□□ -0.2
PLOD3-216ENST00000489927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.8□□□□□ -0.22e-10■■■□□ 15.6
PLOD3-216ENST00000489927 A0A096LPE4 126 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ARPC4-TTLL3A0A0A6YYG9 625 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 A0A1W2PPZ6 126 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 PDE5AO76074 875 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ALDOCP09972 364 aaKnown RBP13.79□□□□□ -0.2
PLOD3-216ENST00000489927 CECR9P0C854 216 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ACAA2P42765 397 aaKnown RBP13.79□□□□□ -0.2
PLOD3-216ENST00000489927 SLC1A6P48664 564 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ANXA11P50995 505 aaKnown RBP13.79□□□□□ -0.2
PLOD3-216ENST00000489927 VSNL1P62760 191 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 TXNL4AP83876 142 aaKnown RBP13.79□□□□□ -0.2
PLOD3-216ENST00000489927 NAAAQ02083 359 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 EFNB3Q15768 340 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ZNF836Q6ZNA1 936 aa13.79□□□□□ -0.2
PLOD3-216ENST00000489927 ZNF621Q6ZSS3 439 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms