RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 RETREG3Q86VR2 466 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 LSMEM1Q8N8F7 131 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 OR9K2Q8NGE7 335 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 MFSD8Q8NHS3 518 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 RNF217Q8TC41 542 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 DNAJA4Q8WW22 397 aaPredicted RBP15.74■□□□□ 0.11
ABCF3-217ENST00000489719 AKAP1Q92667 903 aaKnown RBP eCLIP15.74■□□□□ 0.11
ABCF3-217ENST00000489719 SLC25A36Q96CQ1 311 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 TMEM204Q9BSN7 226 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 EVA1AQ9H8M9 152 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 C12orf10Q9HB07 376 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 FGFR1OP2Q9NVK5 253 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 TAS2R16Q9NYV7 291 aa15.74■□□□□ 0.11
ABCF3-217ENST00000489719 F8P00451 2351 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 HRNRQ86YZ3 2850 aaPredicted RBP15.73■□□□□ 0.11
ABCF3-217ENST00000489719 OR5H1A6NKK0 313 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 HS3ST1O14792 307 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 OR2T1O43869 369 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 NPIPB7O75200 414 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 RAD51DO75771 328 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 PNMTP11086 282 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 MTPNP58546 118 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 TGFBR3Q03167 851 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 SF3A3Q12874 501 aaKnown RBP eCLIP15.73■□□□□ 0.11
ABCF3-217ENST00000489719 FOXD4Q12950 439 aaPredicted RBP15.73■□□□□ 0.11
ABCF3-217ENST00000489719 MMEL1Q495T6 779 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 LRRC75A-AS1Q8N1F1 130 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 TMEM171Q8WVE6 324 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 TMEM45BQ96B21 275 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 SLC47A1Q96FL8 570 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 SH3GL1Q99961 368 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 RASD1Q9Y272 281 aa15.73■□□□□ 0.11
ABCF3-217ENST00000489719 CELSR1Q9NYQ6 3014 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 A0A1B0GWA3 101 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 TMEM229AB2RXF0 380 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 M0QX08 132 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 KRT33AO76009 404 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 MFN2O95140 757 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 RPS5P46782 204 aaKnown RBP15.72■□□□□ 0.11
ABCF3-217ENST00000489719 RGS8P57771 180 aaPredicted RBP15.72■□□□□ 0.11
ABCF3-217ENST00000489719 GLIPR1L2Q4G1C9 344 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 ALG10BQ5I7T1 473 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 ULK3Q6PHR2 472 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 C5orf46Q6UWT4 87 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 NET1Q7Z628 596 aaPredicted RBP15.72■□□□□ 0.11
ABCF3-217ENST00000489719 LSRQ86X29 649 aaPredicted RBP15.72■□□□□ 0.11
ABCF3-217ENST00000489719 PTOV1Q86YD1 416 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 SLC30A8Q8IWU4 369 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 ZNF611Q8N823 705 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 ZIC4Q8N9L1 334 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 SMYD1Q8NB12 490 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 MUS81Q96NY9 551 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 PRR14Q9BWN1 585 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 RSPO3Q9BXY4 272 aaPredicted RBP15.72■□□□□ 0.11
ABCF3-217ENST00000489719 KAT8Q9H7Z6 458 aaKnown RBP15.72■□□□□ 0.11
ABCF3-217ENST00000489719 SLC7A10Q9NS82 523 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 MALT1Q9UDY8 824 aa15.72■□□□□ 0.11
ABCF3-217ENST00000489719 TEP1Q99973 2627 aaKnown RBP15.71■□□□□ 0.11
ABCF3-217ENST00000489719 DPRXA6NFQ7 191 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 GUCY1A3Q02108 690 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 BSPH1Q075Z2 132 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 DMTNQ08495 405 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 KLF10Q13118 480 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 SELPLGQ14242 412 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 MAPRE2Q15555 327 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 OR1Q1Q15612 314 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 INTS11Q5TA45 600 aaKnown RBP15.71■□□□□ 0.11
ABCF3-217ENST00000489719 TSPO2Q5TGU0 170 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 FAM91A1Q658Y4 838 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 ADAM5Q6NVV9 412 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 C6orf89Q6UWU4 347 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 CREB3L2Q70SY1 520 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 RANBP3LQ86VV4 465 aaPredicted RBP15.71■□□□□ 0.11
ABCF3-217ENST00000489719 POMGNT2Q8NAT1 580 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 WFDC11Q8NEX6 87 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 OR52N5Q8NH56 324 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 OR10A6Q8NH74 314 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 SLC26A7Q8TE54 656 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 SLC38A4Q969I6 547 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 KTI12Q96EK9 354 aaPredicted RBP15.71■□□□□ 0.11
ABCF3-217ENST00000489719 ZNF385AQ96PM9 386 aaKnown RBP15.71■□□□□ 0.11
ABCF3-217ENST00000489719 CXorf56Q9H5V9 222 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 MED4Q9NPJ6 270 aa15.71■□□□□ 0.11
ABCF3-217ENST00000489719 TESQ9UGI8 421 aaKnown RBP15.71■□□□□ 0.11
ABCF3-217ENST00000489719 ITPR3Q14573 2671 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 TMCC2O75069 709 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 FOSL1P15407 271 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 HTR2AP28223 471 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 EGR4Q05215 589 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 GABRA6Q16445 453 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 C9orf135Q5VTT2 229 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 KLHL17Q6TDP4 642 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 ABHD12BQ7Z5M8 362 aaPredicted RBP15.7■□□□□ 0.1
ABCF3-217ENST00000489719 PATL1Q86TB9 770 aaKnown RBP15.7■□□□□ 0.1
ABCF3-217ENST00000489719 COMTD1Q86VU5 262 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 PERPQ96FX8 193 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 ECSITQ9BQ95 431 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 SLCO5A1Q9H2Y9 848 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 SAR1AQ9NR31 198 aa15.7■□□□□ 0.1
ABCF3-217ENST00000489719 MAP1AP78559 2803 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms