RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 FGD3Q5JSP0 725 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 OTUD3Q5T2D3 398 aaPredicted RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 SWT1Q5T5J6 900 aaKnown RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 RIPPLY2Q5TAB7 128 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 C1orf146Q5VVC0 180 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 TMEM211Q6ICI0 200 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 VWA1Q6PCB0 445 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 TTC33Q6PID6 262 aaPredicted RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 CLEC18BQ6UXF7 455 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 MRGPRGQ86SM5 289 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 TUSC5Q8IXB3 177 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 OFCC1Q8IZS5 231 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 FAM26EQ8N5C1 309 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 LRRC17Q8N6Y2 441 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 CNEP1R1Q8N9A8 125 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 CLEC18CQ8NCF0 446 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 ZNF417Q8TAU3 575 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 SLC7A13Q8TCU3 470 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 RNF128Q8TEB7 428 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 TMEM239Q8WW34 195 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 CPNE4Q96A23 557 aaPredicted RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 SLCO4A1Q96BD0 722 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 ZNF587Q96SQ5 575 aaPredicted RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 PIP5K1AQ99755 562 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 CHID1Q9BWS9 393 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 TRIM15Q9C019 465 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 RNF122Q9H9V4 155 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 TIGARQ9NQ88 270 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 TRAPPC4Q9Y296 219 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 FAM32AQ9Y421 112 aaKnown RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 ZNF175Q9Y473 711 aa7.39□□□□□ -1.23
SF1-218ENST00000489544 SETXQ7Z333 2677 aaKnown RBP7.39□□□□□ -1.23
SF1-218ENST00000489544 ASH1LQ9NR48 2969 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 PCNX1Q96RV3 2341 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 DIDO1Q9BTC0 2240 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 A0A1W2PNV4 684 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 A1L4Q6 167 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 NKX2-6A6NCS4 301 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 WIPF3A6NGB9 483 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 ERICH4A6NGS2 130 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 AQP12BA6NM10 295 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 CYTIPO60759 359 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 TNFSF13O75888 250 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 HPRP00739 348 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 GPIP06744 558 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 H1F0P07305 194 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 MAKP20794 623 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 FKBP2P26885 142 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 RRM2P31350 389 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 NTF4P34130 210 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 MAGEA2P43356 314 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 KIR2DL2P43627 348 aaPredicted RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 MAP2K6P52564 334 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 SLC35A1P78382 337 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 CHRNB3Q05901 458 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 RASGEF1BQ0VAM2 473 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 LAPTM4AQ15012 233 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 TRAM2Q15035 370 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 SF3B4Q15427 424 aaKnown RBP eCLIP7.38□□□□□ -1.233e-7■■■□□ 15.2
SF1-218ENST00000489544 GUSBP1Q15486 140 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 ZNF74Q16587 644 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 ZSCAN26Q16670 478 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 FAM98BQ52LJ0 330 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 FAM69AQ5T7M9 428 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 PODNL1Q6PEZ8 512 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 ZNF730Q6ZMV8 503 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 SLC46A3Q7Z3Q1 461 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 NUFIP2Q7Z417 695 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 BTLAQ7Z6A9 289 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 CYP4Z1Q86W10 505 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 AQP12AQ8IXF9 295 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 NRMQ8IXM6 262 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 RELL2Q8NC24 303 aaPredicted RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 MFSD8Q8NHS3 518 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 SSC4DQ8WTU2 575 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 STARD4Q96DR4 205 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 MPP4Q96JB8 637 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 TM9SF2Q99805 663 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 PSD2Q9BQI7 771 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 TMEM43Q9BTV4 400 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 TAPBPLQ9BX59 468 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 POLR2J2Q9GZM3 115 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 POLR2J3Q9H1A7 115 aaKnown RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 MMADHCQ9H3L0 296 aaPredicted RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 C12orf49Q9H741 205 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 PAQR5Q9NXK6 330 aaPredicted RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 C6orf203Q9P0P8 240 aaPredicted RBP7.38□□□□□ -1.23
SF1-218ENST00000489544 PRDM4Q9UKN5 801 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 MED31Q9Y3C7 131 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 MYO18BQ8IUG5 2567 aa7.38□□□□□ -1.23
SF1-218ENST00000489544 FLNCQ14315 2725 aa7.37□□□□□ -1.23
SF1-218ENST00000489544 MPDZO75970 2070 aa7.37□□□□□ -1.23
SF1-218ENST00000489544 HELZ2Q9BYK8 2649 aaKnown RBP7.37□□□□□ -1.23
SF1-218ENST00000489544 PHF3Q92576 2039 aaKnown RBP7.37□□□□□ -1.23
SF1-218ENST00000489544 AQP7P3A6NL99 342 aa7.37□□□□□ -1.23
SF1-218ENST00000489544 ZNF716A6NP11 495 aa7.37□□□□□ -1.23
SF1-218ENST00000489544 HSPB2A8KAH6 182 aa7.37□□□□□ -1.23
SF1-218ENST00000489544 EEF1E1-BLOC1S5C9J1V9 151 aa7.37□□□□□ -1.23
SF1-218ENST00000489544 EEF1E1O43324 174 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms