RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 AKR7A3O95154 331 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 VAMP5O95183 116 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 FAM107AO95990 144 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 PSMB1P20618 241 aaKnown RBP15.39■□□□□ 0.05
MDC1-206ENST00000489540 PSME3P61289 254 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 NPTX1Q15818 432 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 ENTPD8Q5MY95 495 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 FAM69AQ5T7M9 428 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 GKAP1Q5VSY0 366 aaPredicted RBP15.39■□□□□ 0.05
MDC1-206ENST00000489540 TMEM225Q6GV28 225 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 TMEM200AQ86VY9 491 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 GABRG1Q8N1C3 465 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 TMEM99Q8N816 258 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 OR6S1Q8NH40 331 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 VANGL1Q8TAA9 524 aaPredicted RBP15.39■□□□□ 0.05
MDC1-206ENST00000489540 KTI12Q96EK9 354 aaPredicted RBP15.39■□□□□ 0.05
MDC1-206ENST00000489540 EPYCQ99645 322 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 MED18Q9BUE0 208 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 PTDSS2Q9BVG9 487 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 PCDHAC1Q9H158 963 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 ALG2Q9H553 416 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 RASSF1Q9NS23 344 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 ZNF226Q9NYT6 803 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 SH3GLB1Q9Y371 365 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 CELSR2Q9HCU4 2923 aa15.39■□□□□ 0.05
MDC1-206ENST00000489540 ANKHD1Q8IWZ3 2542 aaKnown RBP15.38■□□□□ 0.05
MDC1-206ENST00000489540 NAV2Q8IVL1 2488 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 TRAV36DV7A0A075B6V5 113 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 NME4O00746 187 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 GSTA4O15217 222 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 RAMP1O60894 148 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 MRPL33O75394 65 aaKnown RBP15.38■□□□□ 0.05
MDC1-206ENST00000489540 GTF2E2P29084 291 aaKnown RBP15.38■□□□□ 0.05
MDC1-206ENST00000489540 RPS5P46782 204 aaKnown RBP15.38■□□□□ 0.05
MDC1-206ENST00000489540 MFSD13AQ14CX5 517 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 CYBRD1Q53TN4 286 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 Q6ZT83 130 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 RBM45Q8IUH3 476 aaKnown RBP15.38■□□□□ 0.05
MDC1-206ENST00000489540 STEAP2Q8NFT2 490 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 OR4D11Q8NGI4 311 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 TAAR8Q969N4 342 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 SLC25A36Q96CQ1 311 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 USB1Q9BQ65 265 aaKnown RBP15.38■□□□□ 0.05
MDC1-206ENST00000489540 TMEM43Q9BTV4 400 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 SPAG4Q9NPE6 437 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 ABCD2Q9UBJ2 740 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 TAGLN3Q9UI15 199 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 RASD1Q9Y272 281 aa15.38■□□□□ 0.05
MDC1-206ENST00000489540 IGKV1D-42A0A075B6H8 117 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 TRAPPC13A5PLN9 417 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 CPSF4LA6NMK7 179 aaKnown RBP15.37■□□□□ 0.05
MDC1-206ENST00000489540 FTCDNL1E5RQL4 147 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 CHP2O43745 196 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 ADAP00813 363 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 CCKARP32238 428 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 KRTAP10-9P60411 292 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 SELENOWP63302 87 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 ITGADQ13349 1161 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 LRRC23Q53EV4 343 aaPredicted RBP15.37■□□□□ 0.05
MDC1-206ENST00000489540 SFRP5Q5T4F7 317 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 ANKRD34AQ69YU3 496 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 CXorf67Q86X51 503 aaPredicted RBP15.37■□□□□ 0.05
MDC1-206ENST00000489540 CARM1Q86X55 608 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 ADAMTS16Q8TE57 1224 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 LZICQ8WZA0 190 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 APH1AQ96BI3 265 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 MPP4Q96JB8 637 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 POLDIP3Q9BY77 421 aaKnown RBP15.37■□□□□ 0.05
MDC1-206ENST00000489540 POLR2J2Q9GZM3 115 aaKnown RBP15.37■□□□□ 0.05
MDC1-206ENST00000489540 POLR2J3Q9H1A7 115 aaKnown RBP15.37■□□□□ 0.05
MDC1-206ENST00000489540 ADAM21Q9UKJ8 722 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 FLVCR1Q9Y5Y0 555 aa15.37■□□□□ 0.05
MDC1-206ENST00000489540 CXCR6O00574 342 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 FZD7O75084 574 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 GSK3BP49841 420 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 P2RY4P51582 365 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 MNAT1P51948 309 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 FBXW9Q5XUX1 488 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 FBXW10Q5XX13 1052 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 LINC00114Q6XXX2 140 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 OR9K2Q8NGE7 335 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 KCTD14Q9BQ13 255 aaPredicted RBP15.36■□□□□ 0.05
MDC1-206ENST00000489540 ACTR6Q9GZN1 396 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 CLEC4MQ9H2X3 399 aaPredicted RBP15.36■□□□□ 0.05
MDC1-206ENST00000489540 PRSS50Q9UI38 385 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 B3GALT5Q9Y2C3 310 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 CRYBG3Q68DQ2 2970 aa15.36■□□□□ 0.05
MDC1-206ENST00000489540 MAST4O15021 2626 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 SHOX2O60902 331 aaPredicted RBP15.35■□□□□ 0.05
MDC1-206ENST00000489540 IL32P24001 234 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 NTF4P34130 210 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 KRT72Q14CN4 511 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 POU4F3Q15319 338 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 H1FNTQ75WM6 255 aaPredicted RBP15.35■□□□□ 0.05
MDC1-206ENST00000489540 GPAT4Q86UL3 456 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 LSRQ86X29 649 aaPredicted RBP15.35■□□□□ 0.05
MDC1-206ENST00000489540 P3H2Q8IVL5 708 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 UBE2J2Q8N2K1 259 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 CCDC197Q8NCU1 140 aa15.35■□□□□ 0.05
MDC1-206ENST00000489540 KISS1RQ969F8 398 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms