RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TUBAL3A6NHL2 446 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 LRRIQ4A6NIV6 560 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 OR8U8P0C7N1 319 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 RBMY1CP0DJD4 496 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 CHMLP26374 656 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 SYKP43405 635 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 CCDC173Q0VFZ6 552 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 ARL6IP1Q15041 203 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 PPP1R7Q15435 360 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 DGUOKQ16854 277 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 LRRC36Q1X8D7 754 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 SPANXN2Q5MJ10 180 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 SLC25A30Q5SVS4 291 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 RAET1LQ5VY80 246 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 RNLSQ5VYX0 342 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 FRA10AC1Q70Z53 315 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 MARCH9Q86YJ5 346 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 NUDCD3Q8IVD9 361 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 CADM2Q8N3J6 435 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 TPRX1Q8N7U7 411 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 CEP112Q8N8E3 955 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 KLHL30-AS1Q8NEE0 82 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 ELMO1Q92556 727 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 FGF11Q92914 225 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 SLC25A38Q96DW6 304 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 PAGE5Q96GU1 130 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 PGLYRP4Q96LB8 373 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 PANX1Q96RD7 426 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 MRPL45Q9BRJ2 306 aaKnown RBP3.22□□□□□ -1.89
XRN1-213ENST00000489241 CENPKQ9BS16 269 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 C19orf24Q9BVV8 132 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 EXO5Q9H790 373 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 KIAA1257Q9ULG3 409 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 TMCO1Q9UM00 188 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 UBQLN1Q9UMX0 589 aaKnown RBP3.22□□□□□ -1.89
XRN1-213ENST00000489241 KCNIP3Q9Y2W7 256 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 STARD10Q9Y365 291 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 FLVCR1Q9Y5Y0 555 aa3.22□□□□□ -1.89
XRN1-213ENST00000489241 TP53BP1Q12888 1972 aaPredicted RBP3.21□□□□□ -1.89
XRN1-213ENST00000489241 A0A0G2JRQ6 117 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 CCDC182A6NF36 153 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 OR5B21A6NL26 309 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 K7N7A8 449 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 WWP2O00308 870 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 MBTPS2O43462 519 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 UGT1A9O60656 530 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 CDH16O75309 829 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 OR7A10O76100 309 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 C1orf105O95561 183 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 LGI1O95970 557 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 KRT14P02533 472 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 KRT6AP02538 564 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 SERPIND1P05546 499 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 GZMAP12544 262 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 TNNI1P19237 187 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 IL12AP29459 219 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 AQP1P29972 269 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 FDFT1P37268 417 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 KPNA2P52292 529 aaKnown RBP3.21□□□□□ -1.9
XRN1-213ENST00000489241 CDH6P55285 790 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 BCL2L1Q07817 233 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 SCRN3Q0VDG4 424 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 OR5I1Q13606 314 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 ARHGAP19Q14CB8 494 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 ALKBH6Q3KRA9 238 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 KLF17Q5JT82 389 aaPredicted RBP3.21□□□□□ -1.9
XRN1-213ENST00000489241 SPINK14Q6IE38 97 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 HSDL2Q6YN16 418 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 BIVMQ86UB2 503 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 ERI1Q8IV48 349 aaKnown RBP3.21□□□□□ -1.9
XRN1-213ENST00000489241 OR13F1Q8NGS4 319 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 CHCHD10Q8WYQ3 142 aaPredicted RBP3.21□□□□□ -1.9
XRN1-213ENST00000489241 TECTBQ96PL2 329 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 SIGLEC12Q96PQ1 595 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 MTG1Q9BT17 334 aaPredicted RBP3.21□□□□□ -1.9
XRN1-213ENST00000489241 TMEM185BQ9H7F4 350 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 SUDS3Q9H7L9 328 aaPredicted RBP3.21□□□□□ -1.9
XRN1-213ENST00000489241 CRLF2Q9HC73 371 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 APOBEC3BQ9UH17 382 aaKnown RBP3.21□□□□□ -1.9
XRN1-213ENST00000489241 NINLQ9Y2I6 1382 aa3.21□□□□□ -1.9
XRN1-213ENST00000489241 SH3TC1Q8TE82 1336 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 C9JVG2 144 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 H0YIV9 168 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 HIP1O00291 1037 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 BCL2L11O43521 198 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 TOM1O60784 492 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 CCDC166P0CW27 439 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 ZNF43P17038 809 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 ZP3P21754 424 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 RFC4P35249 363 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 UGT1A3P35503 534 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 VHLP40337 213 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 GSSP48637 474 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 KCNJ2P63252 427 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 GNMTQ14749 295 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 ZNF239Q16600 458 aaKnown RBP3.2□□□□□ -1.9
XRN1-213ENST00000489241 GSG1Q2KHT4 349 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 PAGE2BQ5JRK9 111 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 ATAD3CQ5T2N8 411 aa3.2□□□□□ -1.9
XRN1-213ENST00000489241 OLFML2AQ68BL7 652 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms