RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 EGR4Q05215 589 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 FAPQ12884 760 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 PPA1Q15181 289 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 TIMM23BQ5SRD1 257 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 HIPK4Q8NE63 616 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 OR9K2Q8NGE7 335 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 AKAP1Q92667 903 aaKnown RBP eCLIP22.02■■□□□ 1.12
HMGN1-217ENST00000489072 WFDC6Q9BQY6 131 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 PTDSS2Q9BVG9 487 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 TAPBPLQ9BX59 468 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 NGBQ9NPG2 151 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 ASB6Q9NWX5 421 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 RNF115Q9Y4L5 304 aa22.02■■□□□ 1.12
HMGN1-217ENST00000489072 A0A1B0GWA3 101 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 OR5H1A6NKK0 313 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 PDLIM1O00151 329 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 FBP2O00757 339 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 ITGA5P08648 1049 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 BSPH1Q075Z2 132 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 DMTNQ08495 405 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 SF3A3Q12874 501 aaKnown RBP eCLIP22.01■■□□□ 1.116e-7■□□□□ 11.3
HMGN1-217ENST00000489072 NFYCQ13952 458 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 C6orf89Q6UWU4 347 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 LRRC75A-AS1Q8N1F1 130 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 LSMEM1Q8N8F7 131 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 NEUROG1Q92886 237 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 TMEM45BQ96B21 275 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 ZNF385AQ96PM9 386 aaKnown RBP22.01■■□□□ 1.11
HMGN1-217ENST00000489072 ZNF607Q96SK3 696 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 SF3B5Q9BWJ5 86 aaKnown RBP22.01■■□□□ 1.11
HMGN1-217ENST00000489072 ESRP2Q9H6T0 727 aaKnown RBP22.01■■□□□ 1.11
HMGN1-217ENST00000489072 SLC7A10Q9NS82 523 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 PARPBPQ9NWS1 579 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 NPAP1Q9NZP6 1156 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 RPS6KB2Q9UBS0 482 aa22.01■■□□□ 1.11
HMGN1-217ENST00000489072 FTCDNL1E5RQL4 147 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 CLOCKO15516 846 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 CD3EP07766 207 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 PCBP3P57721 371 aaKnown RBP22■■□□□ 1.11
HMGN1-217ENST00000489072 TSPO2Q5TGU0 170 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 ADAM5Q6NVV9 412 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 GPAT4Q86UL3 456 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 P2RY8Q86VZ1 359 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 ARMC8Q8IUR7 673 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 ZNF611Q8N823 705 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 KTI12Q96EK9 354 aaPredicted RBP22■■□□□ 1.11
HMGN1-217ENST00000489072 TAS2R16Q9NYV7 291 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 ANGPT4Q9Y264 503 aa22■■□□□ 1.11
HMGN1-217ENST00000489072 NIPBLQ6KC79 2804 aaeCLIP21.99■■□□□ 1.11
HMGN1-217ENST00000489072 CIB4A0PJX0 185 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 PRORSD1PA6NEY8 169 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 ELOA3DA6NLF2 546 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-217ENST00000489072 CCT8L1PA6NM43 557 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 TPST2O60704 377 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 MFN2O95140 757 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 AHSA1O95433 338 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 TROVE2P10155 538 aaKnown RBP eCLIP21.99■■□□□ 1.11
HMGN1-217ENST00000489072 RPS5P46782 204 aaKnown RBP21.99■■□□□ 1.11
HMGN1-217ENST00000489072 CYP51A1Q16850 503 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 ELOA3BQ3SY89 546 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 SHEQ5VZ18 495 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 NET1Q7Z628 596 aaPredicted RBP21.99■■□□□ 1.11
HMGN1-217ENST00000489072 C11orf65Q8NCR3 313 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 ELOA3Q8NG57 546 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 MFSD8Q8NHS3 518 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 MUCL1Q96DR8 90 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 TRIM2Q9C040 744 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 KAT8Q9H7Z6 458 aaKnown RBP21.99■■□□□ 1.11
HMGN1-217ENST00000489072 C12orf10Q9HB07 376 aa21.99■■□□□ 1.11
HMGN1-217ENST00000489072 IGKV1D-42A0A075B6H8 117 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 SERPINB7O75635 380 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 RGS8P57771 180 aaPredicted RBP21.98■■□□□ 1.11
HMGN1-217ENST00000489072 RBBP4Q09028 425 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 GABRA6Q16445 453 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 Q5PR19 223 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 C9orf135Q5VTT2 229 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 TMEM225Q6GV28 225 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 AAED1Q7RTV5 226 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 P3H2Q8IVL5 708 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 SMYD1Q8NB12 490 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 KBTBD8Q8NFY9 601 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 SLC25A36Q96CQ1 311 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 PERPQ96FX8 193 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 PIF1Q9H611 641 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 UPB1Q9UBR1 384 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 TESQ9UGI8 421 aaKnown RBP21.98■■□□□ 1.11
HMGN1-217ENST00000489072 SLC25A15Q9Y619 301 aa21.98■■□□□ 1.11
HMGN1-217ENST00000489072 A0A1W2PR80 420 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 FZD7O75084 574 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 PNMTP11086 282 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 ARFIP2P53365 341 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 GUCY1A3Q02108 690 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 OR52N5Q8NH56 324 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 DNAJA4Q8WW22 397 aaPredicted RBP21.97■■□□□ 1.11
HMGN1-217ENST00000489072 TAAR8Q969N4 342 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 MUS81Q96NY9 551 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 AMBRA1Q9C0C7 1298 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 SEC14L4Q9UDX3 406 aa21.97■■□□□ 1.11
HMGN1-217ENST00000489072 ARHGEF9O43307 516 aa21.96■■□□□ 1.11
HMGN1-217ENST00000489072 VAMP5O95183 116 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms