RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 C1orf140Q5VVS0 124 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 TMEM225Q6GV28 225 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 OR7E24Q6IFN5 339 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 KLHL17Q6TDP4 642 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 SSX8Q7RTT4 187 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 AAED1Q7RTV5 226 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 MSRB3Q8IXL7 192 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 PIAS4Q8N2W9 510 aaPredicted RBP10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 WDR31Q8NA23 367 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 NFKBIDQ8NI38 313 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 DYDC1Q8WWB3 177 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 C3orf49Q96BT1 292 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 SPDL1Q96EA4 605 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 TRMT61AQ96FX7 289 aaKnown RBP10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 ZNF385AQ96PM9 386 aaKnown RBP10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 CCDC28BQ9BUN5 200 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 TAPBPLQ9BX59 468 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 RSPO3Q9BXY4 272 aaPredicted RBP10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 RAD21L1Q9H4I0 556 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 BCL2L10Q9HD36 194 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 SLC52A3Q9NQ40 469 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 PRDM4Q9UKN5 801 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 USF3Q68DE3 2245 aa10.49□□□□□ -0.73
CCHCR1-215ENST00000488920 AQP7P3A6NL99 342 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 BMP2P12643 396 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 CDH2P19022 906 aaPredicted RBP10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 CD40P25942 277 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 SPOCK1Q08629 439 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 FADDQ13158 208 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 CLEC12BQ2HXU8 276 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 LRIF1Q5T3J3 769 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 GCNT6Q5T4J0 391 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 PRAMEF8Q5VWM4 474 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 PRAMEF7Q5VXH5 474 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 SLC22A25Q6T423 547 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 TMEM108Q6UXF1 575 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 C10orf111Q8N326 155 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 BBS10Q8TAM1 723 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 TMEM45BQ96B21 275 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 SLC25A36Q96CQ1 311 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 THOC1Q96FV9 657 aaKnown RBP10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 RADILQ96JH8 1075 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 TRAF4Q9BUZ4 470 aaPredicted RBP10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 SF3B5Q9BWJ5 86 aaKnown RBP10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 PRR14Q9BWN1 585 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 ALG2Q9H553 416 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 VAPAQ9P0L0 249 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 DCTN4Q9UJW0 460 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 POU2F3Q9UKI9 436 aa10.48□□□□□ -0.73
CCHCR1-215ENST00000488920 TMEM229AB2RXF0 380 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 E7EQL1 145 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 TPST1O60507 370 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 NPIPB7O75200 414 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 NDUFS7O75251 213 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 KRT33AO76009 404 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 IGHV4-39P01824 125 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 ETS2P15036 469 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 PTAFRP25105 342 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 PCSK6P29122 969 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 MPGP29372 298 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 ACVR1BP36896 505 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 P2RY4P51582 365 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 SLC25A3Q00325 362 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 CDK6Q00534 326 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 TGFBR3Q03167 851 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 LGALS3BPQ08380 585 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 VEZF1Q14119 521 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 COMTD1Q86VU5 262 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 KDM8Q8N371 416 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 MAPK1IP1LQ8NDC0 245 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 STK35Q8TDR2 534 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 KTI12Q96EK9 354 aaPredicted RBP10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 SLCO5A1Q9H2Y9 848 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 IKZF5Q9H5V7 419 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 SLC17A5Q9NRA2 495 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 INTS9Q9NV88 658 aaKnown RBP10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 FAIMQ9NVQ4 179 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 RPS6KB2Q9UBS0 482 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 GDF2Q9UK05 429 aaPredicted RBP10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 MGAT4BQ9UQ53 548 aa10.47□□□□□ -0.73
CCHCR1-215ENST00000488920 ELOA3DA6NLF2 546 aaPredicted RBP10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 AHSA1O95433 338 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 ARAFP10398 606 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 PPIBP23284 216 aaKnown RBP10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 PRKAR1BP31321 381 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 RPS5P46782 204 aaKnown RBP10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 SELENOPP49908 381 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 ATP4BP51164 291 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 PRPS1P60891 318 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 EGR4Q05215 589 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 SQLEQ14534 574 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 ELOA3BQ3SY89 546 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 GLIPR1L2Q4G1C9 344 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 HIKESHIQ53FT3 197 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 AGAP6Q5VW22 663 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 REEP3Q6NUK4 255 aa10.46□□□□□ -0.73
CCHCR1-215ENST00000488920 B3GLCTQ6Y288 498 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms