RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PROX1Q92786 737 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 OR52E6Q96RD3 313 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 KCNK17Q96T54 332 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 PNPOQ9NVS9 261 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 PMF1-BGLAPU3KQ54 211 aa16.1■□□□□ 0.17
HDAC6-231ENST00000488905 CDHR4A6H8M9 788 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 SDHDO14521 159 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 PHF1O43189 567 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-231ENST00000488905 LY6HO94772 140 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 GSNP06396 782 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 IGHV4-31P0DP07 118 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 CDH2P19022 906 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-231ENST00000488905 CXCR1P25024 350 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 STX3Q13277 289 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 GSTA3Q16772 222 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 LIN52Q52LA3 116 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 HIKESHIQ53FT3 197 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 ZNF836Q6ZNA1 936 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 ABHD12BQ7Z5M8 362 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-231ENST00000488905 GPAT4Q86UL3 456 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 ZIC4Q8N9L1 334 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 BOD1Q96IK1 185 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 PIF1Q9H611 641 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 RLIMQ9NVW2 624 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 P2RX2Q9UBL9 471 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 MOKQ9UQ07 419 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 FKBP7Q9Y680 259 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 DSPPQ9NZW4 1301 aa16.09■□□□□ 0.17
HDAC6-231ENST00000488905 FRS3O43559 492 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 GKN3PP0CG01 181 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 USF1P22415 310 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-231ENST00000488905 BST1Q10588 318 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 MAPK11Q15759 364 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 SWI5Q1ZZU3 235 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 CYB5R2Q6BCY4 276 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 SPATA19Q7Z5L4 167 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 VRK2Q86Y07 508 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 FBXO17Q96EF6 278 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 ALKBH3Q96Q83 286 aaPredicted RBP16.08■□□□□ 0.16
HDAC6-231ENST00000488905 ZBTB18Q99592 522 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 TAPBPLQ9BX59 468 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 OBP2BQ9NPH6 170 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 LPAR3Q9UBY5 353 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 GPR45Q9Y5Y3 372 aa16.08■□□□□ 0.16
HDAC6-231ENST00000488905 IGHV1-18A0A0C4DH31 117 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 ZNF587BE7ETH6 402 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 RFXANKO14593 260 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 KLF11O14901 512 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 KRT75O95678 551 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 F12P00748 615 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-231ENST00000488905 P2RY4P51582 365 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 MVDP53602 400 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 BNIP2Q12982 314 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 MPP2Q14168 576 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 RNF220Q5VTB9 566 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 WBP2NLQ6ICG8 309 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 CADM2Q8N3J6 435 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 GLB1L3Q8NCI6 653 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-231ENST00000488905 OR52P1PQ8NH57 321 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 AURKBQ96GD4 344 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-231ENST00000488905 SORCS2Q96PQ0 1159 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 SLC38A2Q96QD8 506 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 BEX2Q9BXY8 128 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 SLC6A13Q9NSD5 602 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 ADPRHL2Q9NX46 363 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 CALML5Q9NZT1 146 aa16.07■□□□□ 0.16
HDAC6-231ENST00000488905 ZNF443Q9Y2A4 671 aaPredicted RBP16.07■□□□□ 0.16
HDAC6-231ENST00000488905 A8MVM7 634 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 KRT33AO76009 404 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 BCHEP06276 602 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 EPHA3P29320 983 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 ACAA2P42765 397 aaKnown RBP16.06■□□□□ 0.16
HDAC6-231ENST00000488905 SELENOPP49908 381 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 PDLIM4P50479 330 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 CRISP3P54108 245 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 COPZ1P61923 177 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 SNRPD2P62316 118 aaKnown RBP16.06■□□□□ 0.16
HDAC6-231ENST00000488905 MST1LQ2TV78 715 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 TBRG1Q3YBR2 411 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 OR1K1Q8NGR3 316 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 KCNS3Q9BQ31 491 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 PIMREGQ9BSJ6 248 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 SHARPINQ9H0F6 387 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 CENPHQ9H3R5 247 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 KCNK9Q9NPC2 374 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 TMEM45AQ9NWC5 275 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 PRDM4Q9UKN5 801 aa16.06■□□□□ 0.16
HDAC6-231ENST00000488905 A0A096LPI6 279 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 VWC2LB2RUY7 222 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 TMEM229AB2RXF0 380 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 NDUFS8O00217 210 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 VAMP5O95183 116 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 LGI1O95970 557 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 ETFAP13804 333 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 GZMKP49863 264 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 LSM11P83369 360 aaKnown RBP eCLIP16.05■□□□□ 0.16
HDAC6-231ENST00000488905 LGALS3BPQ08380 585 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 GGTLC2Q14390 218 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 TNFAIP8L3Q5GJ75 292 aa16.05■□□□□ 0.16
HDAC6-231ENST00000488905 C1orf140Q5VVS0 124 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms