RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 CADM2Q8N3J6 435 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TMEM99Q8N816 258 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 WDR31Q8NA23 367 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 C1orf162Q8NEQ5 155 aaPredicted RBP9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 OR9K2Q8NGE7 335 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 MUCL1Q96DR8 90 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ATP6V1G3Q96LB4 118 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZNF385AQ96PM9 386 aaKnown RBP9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PTDSS2Q9BVG9 487 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SPATA9Q9BWV2 254 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 BCL2L10Q9HD36 194 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 VAPAQ9P0L0 249 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SLAMF8Q9P0V8 285 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 DCTN4Q9UJW0 460 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SVEP1Q4LDE5 3571 aa9.85□□□□□ -0.83
RAB11FIP3-210ENST00000487899 A0A0G2JPF8 293 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HNRNPCL2B2RXH8 293 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HNRNPCL3B7ZW38 293 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CLIC1O00299 241 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HNRNPCL1O60812 293 aaKnown RBP9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 NDUFS7O75251 213 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 GPIP06744 558 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HNRNPCL4P0DMR1 293 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ARAFP10398 606 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HTR2AP28223 471 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 IDH3AP50213 366 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZNF83P51522 516 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 STX1BP61266 288 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 HOXC5Q00444 222 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 EGR4Q05215 589 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 LGALS3BPQ08380 585 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 TNK1Q13470 666 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 LARS2Q15031 903 aaKnown RBP9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 PAGE3Q5JUK9 113 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 C9orf135Q5VTT2 229 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 BLOC1S3Q6QNY0 202 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 C6orf89Q6UWU4 347 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SSX8Q7RTT4 187 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 GOLGA6L1Q8N7Z2 621 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 BBS10Q8TAM1 723 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SLC35B4Q969S0 331 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SPDL1Q96EA4 605 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 MUS81Q96NY9 551 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ALKBH3Q96Q83 286 aaPredicted RBP9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 NAA11Q9BSU3 229 aaPredicted RBP9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 SLCO5A1Q9H2Y9 848 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 ZNF385DQ9H6B1 395 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 THUMPD1Q9NXG2 353 aaKnown RBP9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 GDF2Q9UK05 429 aaPredicted RBP9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 GMEB1Q9Y692 573 aa9.84□□□□□ -0.83
RAB11FIP3-210ENST00000487899 CIB4A0PJX0 185 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CCT8L1PA6NM43 557 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 A8MVM7 634 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 E7EQL1 145 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 TGDSO95455 350 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CXCR1P25024 350 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 PTAFRP25105 342 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CD40P25942 277 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ACVR1BP36896 505 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 VEZF1Q14119 521 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ETFDHQ16134 617 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ZSWIM7Q19AV6 140 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CLEC12BQ2HXU8 276 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 GLIPR1L2Q4G1C9 344 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ZNF311Q5JNZ3 666 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 C1orf140Q5VVS0 124 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 TMEM108Q6UXF1 575 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 LINGO2Q7L985 606 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 C17orf78Q8N4C9 275 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 NFKBIDQ8NI38 313 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 LRRC8CQ8TDW0 803 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CPPED1Q9BRF8 314 aaPredicted RBP9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CCDC28BQ9BUN5 200 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 SF3B5Q9BWJ5 86 aaKnown RBP9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 GRIP2Q9C0E4 1043 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 NELFAQ9H3P2 528 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 SLC17A5Q9NRA2 495 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ADPRHL2Q9NX46 363 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CISD1Q9NZ45 108 aaKnown RBP9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 CCDC167Q9P0B6 97 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 SEC14L4Q9UDX3 406 aa9.83□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ALPK2Q86TB3 2170 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 IGKV1D-42A0A075B6H8 117 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 INAFM1C9JVW0 142 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 RNF223E7ERA6 249 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 PNMTP11086 282 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ETS2P15036 469 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 NCF2P19878 526 aaPredicted RBP9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 PTNP21246 168 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 MPGP29372 298 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 PRKAR1BP31321 381 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 SELENOPP49908 381 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ATP4BP51164 291 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 AQP5P55064 265 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 COPZ1P61923 177 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 ADRM1Q16186 407 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 GCNT6Q5T4J0 391 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 OR7E24Q6IFN5 339 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 GPAT4Q86UL3 456 aa9.82□□□□□ -0.84
RAB11FIP3-210ENST00000487899 PRIMA1Q86XR5 153 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms