RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 HAO1Q9UJM8 370 aa7.48□□□□□ -1.21
PRKCB-208ENST00000487674 OSGIN1Q9UJX0 560 aa7.48□□□□□ -1.21
PRKCB-208ENST00000487674 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.48□□□□□ -1.21
PRKCB-208ENST00000487674 TMED7Q9Y3B3 224 aa7.48□□□□□ -1.21
PRKCB-208ENST00000487674 ATP23Q9Y6H3 246 aa7.48□□□□□ -1.21
PRKCB-208ENST00000487674 ARFGEF3Q5TH69 2177 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 TMEM72A0PK05 275 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 WDR91A4D1P6 747 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 CFAP73A6NFT4 308 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 ATP6V1G2-DDX39BF2Z307 99 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 PHF1O43189 567 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-208ENST00000487674 WNT11O96014 354 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 CHRM4P08173 479 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 ZNF16P17020 682 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-208ENST00000487674 LBPP18428 481 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 TACR3P29371 465 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 MPGP29372 298 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 S100A3P33764 101 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 RPL14P50914 215 aaKnown RBP7.47□□□□□ -1.21
PRKCB-208ENST00000487674 PRPS1P60891 318 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 LRRC74AQ0VAA2 488 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 EPS8Q12929 822 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 OTUD3Q5T2D3 398 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-208ENST00000487674 MRPL2Q5T653 305 aaKnown RBP7.47□□□□□ -1.21
PRKCB-208ENST00000487674 TSPO2Q5TGU0 170 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 C9orf135Q5VTT2 229 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 OGFOD2Q6N063 350 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 LRRC74BQ6ZQY2 392 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 ZNF440Q8IYI8 595 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 ANKFN1Q8N957 763 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 POMGNT2Q8NAT1 580 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 OR9K2Q8NGE7 335 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 C10orf105Q8TEF2 133 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 PROX1Q92786 737 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 BOD1Q96IK1 185 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 PANX1Q96RD7 426 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 SORT1Q99523 831 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 TMEM109Q9BVC6 243 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 SF3B5Q9BWJ5 86 aaKnown RBP7.47□□□□□ -1.21
PRKCB-208ENST00000487674 C1QTNF6Q9BXI9 259 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 NUF2Q9BZD4 464 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 C20orf27Q9GZN8 174 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 PIF1Q9H611 641 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 MEAF6Q9HAF1 191 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 SSU72Q9NP77 194 aaKnown RBP7.47□□□□□ -1.21
PRKCB-208ENST00000487674 OBP2BQ9NPH6 170 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 FKBP7Q9Y680 259 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 PMF1-BGLAPU3KQ54 211 aa7.47□□□□□ -1.21
PRKCB-208ENST00000487674 CUBNO60494 3623 aa7.46□□□□□ -1.21
PRKCB-208ENST00000487674 ZC3H12DA2A288 527 aaKnown RBP7.46□□□□□ -1.22
PRKCB-208ENST00000487674 CCDC154A6NI56 674 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 LIPT2A6NK58 231 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 AQP7P3A6NL99 342 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 TM9SF1O15321 606 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 C1QCP02747 245 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 PGRP06401 933 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 GPIP06744 558 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 DBIP07108 87 aaKnown RBP7.46□□□□□ -1.22
PRKCB-208ENST00000487674 IGHV4-31P0DP07 118 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 NR2F1P10589 423 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 IL7RP16871 459 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 USF1P22415 310 aaPredicted RBP7.46□□□□□ -1.22
PRKCB-208ENST00000487674 APOBEC3AP31941 199 aaPredicted RBP7.46□□□□□ -1.22
PRKCB-208ENST00000487674 SLC1A6P48664 564 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 SYPL1Q16563 259 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 GSTA3Q16772 222 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 KRT71Q3SY84 523 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 LIN52Q52LA3 116 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 CYB5R2Q6BCY4 276 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 AAED1Q7RTV5 226 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.22
PRKCB-208ENST00000487674 PEX5LQ8IYB4 626 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 Q8N3U1 123 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 TRIM44Q96DX7 344 aaPredicted RBP7.46□□□□□ -1.22
PRKCB-208ENST00000487674 TEX37Q96LM6 180 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 BEX2Q9BXY8 128 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 KRTAP4-8Q9BYQ9 185 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 ADAM19Q9H013 955 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 MTHFD2LQ9H903 347 aaPredicted RBP7.46□□□□□ -1.22
PRKCB-208ENST00000487674 AIG1Q9NVV5 245 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 PRDM4Q9UKN5 801 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 MOKQ9UQ07 419 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.46□□□□□ -1.222e-9■□□□□ 11.3
PRKCB-208ENST00000487674 DSPPQ9NZW4 1301 aa7.46□□□□□ -1.22
PRKCB-208ENST00000487674 MALRD1Q5VYJ5 2156 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 CDHR4A6H8M9 788 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF587BE7ETH6 402 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 NDUFS8O00217 210 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 RGS16O15492 202 aaPredicted RBP7.45□□□□□ -1.22
PRKCB-208ENST00000487674 LY6HO94772 140 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 AKR7A3O95154 331 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 KRT75O95678 551 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 ALDOCP09972 364 aaKnown RBP7.45□□□□□ -1.22
PRKCB-208ENST00000487674 BGNP21810 368 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 PAX7P23759 505 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 CXCR1P25024 350 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 THBS2P35442 1172 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 CDKN2CP42773 168 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 GZMKP49863 264 aa7.45□□□□□ -1.22
PRKCB-208ENST00000487674 PDLIM4P50479 330 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms