RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 GPX3P22352 226 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 NUP214P35658 2090 aaPredicted RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 SOX3P41225 446 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 MAP3K8P41279 467 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 HLCSP50747 726 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 SSR4P51571 173 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 NR0B1P51843 470 aaKnown RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 HBA1P69905 142 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 ARG2P78540 354 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 HSPB3Q12988 150 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 OR1C1Q15619 314 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 SMN1Q16637 294 aaKnown RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 ZNF791Q3KP31 576 aaPredicted RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 SPANXN4Q5MJ08 99 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 FUNDC1Q8IVP5 155 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 CLECL1Q8IZS7 167 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 FAM9CQ8IZT9 166 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 CADM3Q8N126 398 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 CLEC4FQ8N1N0 589 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 OR2L13Q8N349 312 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 HORMAD2Q8N7B1 307 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 MDS2Q8NDY4 140 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 OR8J2Q8NGG1 315 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 OR9I1Q8NGQ6 314 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 PSMA8Q8TAA3 256 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 NUBPLQ8TB37 319 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 OR5P2Q8WZ92 322 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 TESCQ96BS2 214 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 GIMAP5Q96F15 307 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 ZBED6CLQ96FA7 236 aaPredicted RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 C16orf58Q96GQ5 468 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 ART5Q96L15 291 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 VSTM2LQ96N03 204 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 UTP23Q9BRU9 249 aaKnown RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 CCDC28BQ9BUN5 200 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 ITPAQ9BY32 194 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 NXF5Q9H1B4 397 aaKnown RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 SLC52A3Q9NQ40 469 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 TCF7L2Q9NQB0 619 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 SDR39U1Q9NRG7 319 aaPredicted RBP5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 GIMAP4Q9NUV9 329 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 COPS7AQ9UBW8 275 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 COL6A5A8TX70 2615 aa5.61□□□□□ -1.51
RTFDC1-209ENST00000487211 PRRC2CQ9Y520 2896 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 A0A0G2JND7 137 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 PRSS51A0A1B0GVH4 220 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CGB1A6NKQ9 187 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 TTC36A6NLP5 189 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 HSPB6O14558 160 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 BCAS2O75934 225 aaPredicted RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 SORBS2O94875 1100 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 HEXAP06865 529 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CT45A8P0DMV1 189 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CT45A9P0DMV2 189 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 IDO1P14902 403 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 NTSP30990 170 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 HPCAL1P37235 193 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 RPL3P39023 403 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CDKN2CP42773 168 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 PPICP45877 212 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 GPR12P47775 334 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CCT3P49368 545 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 MRPL19P49406 292 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CYB561P49447 251 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 MLLT10P55197 1068 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 OC90Q02509 493 aaPredicted RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 NNATQ16517 81 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 GSTA3Q16772 222 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 FAM174BQ3ZCQ3 159 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 PRR30Q53SZ7 412 aaPredicted RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CT45A2Q5DJT8 189 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 LCE5AQ5TCM9 118 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 SLC25A25Q6KCM7 469 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 CFAP161Q6P656 301 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 KLHL24Q6TFL4 600 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 NPSR1Q6W5P4 371 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 GALNTL5Q7Z4T8 443 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 TBC1D26Q86UD7 250 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 ANKRD46Q86W74 232 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 HPS6Q86YV9 775 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 PRR22Q8IZ63 422 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 TMEM156Q8N614 296 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 NATD1Q8N6N6 113 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 TM9SF4Q92544 642 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 PNPLA2Q96AD5 504 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 SNRNP40Q96DI7 357 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 ERP27Q96DN0 273 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 FAM120BQ96EK7 910 aaKnown RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 PERPQ96FX8 193 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 SCMH1Q96GD3 660 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 TAAR6Q96RI8 345 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 GAL3ST4Q96RP7 486 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 TREX2Q9BQ50 279 aaPredicted RBP5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 INPP5KQ9BT40 448 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 ZNF385DQ9H6B1 395 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 FOLH1BQ9HBA9 442 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 PROK2Q9HC23 129 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 SH2D2AQ9NP31 389 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 KLHL1Q9NR64 748 aa5.6□□□□□ -1.51
RTFDC1-209ENST00000487211 DEPPQ9NTK1 212 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms